RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SLC22A23A1A5C7 686 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 GCM2O75603 506 aaPredicted RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 UBL3O95164 117 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SELEP16581 610 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SPINK2P20155 84 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 UQCRC1P31930 480 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 MTCP1P56278 107 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CBX3Q13185 183 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 KRTCAP3Q53RY4 240 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CCDC36Q8IYA8 594 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 OR6V1Q8N148 313 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SUMF1Q8NBK3 374 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ZC3HAV1LQ96H79 300 aaKnown RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SIAEQ9HAT2 523 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 RHBDL2Q9NX52 303 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 NOTOA8MTQ0 251 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 TRAPPC2LH3BP13 241 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 SLC2A1P11166 492 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 SNU13P55769 128 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 SCGB2B2Q4G0G5 96 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ELFN2Q5R3F8 820 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 LCN10Q6JVE6 187 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 OR51T1Q8NGJ9 327 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 NDNFQ8TB73 568 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ZCCHC14Q8WYQ9 949 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 KCTD12Q96CX2 325 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 UTRNP46939 3433 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 HRGP04196 525 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 TMIGD3P0DMS9 266 aaPredicted RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CLUP10909 449 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 LIMK1P53667 647 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 HERV-K104P61576 105 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CHRFAM7AQ494W8 412 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF565Q8N9K5 539 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 LIPHQ8WWY8 451 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 WACQ9BTA9 647 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ABHD6Q9BV23 337 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 DPAGT1Q9H3H5 408 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 TAS2R8Q9NYW2 309 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 WASF3Q9UPY6 502 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 B3GNT3Q9Y2A9 372 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CACNA1CQ13936 2221 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 BGLAPP02818 100 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 PSKH1P11801 424 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF35P13682 527 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 MTNR1BP49286 362 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ACTBP60709 375 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ACTG1P63261 375 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 SLC17A1Q14916 467 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ZMAT1Q5H9K5 638 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 Q8N402 240 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 NKAIN3Q8N8D7 197 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 MINDY2Q8NBR6 621 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 STEAP2Q8NFT2 490 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 SEMA6DQ8NFY4 1073 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 OR11L1Q8NGX0 322 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 OTOSQ8NHW6 89 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 OR14A2Q96R54 314 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 TXNL4BQ9NX01 149 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CCDC59Q9P031 241 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CEPT1Q9Y6K0 416 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 C5orf49A4QMS7 147 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 OR6C68A6NDL8 312 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 J3QRK9 145 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 XRCC2O43543 280 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 RAF1P04049 648 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 HOXD4P09016 255 aaPredicted RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 RPS27P42677 84 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 HCCSP53701 268 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ARF1P84077 181 aaKnown RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 SLC22A6Q4U2R8 563 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CDCP2Q5VXM1 449 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 RAB12Q6IQ22 244 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 NFAM1Q8NET5 270 aaPredicted RBP7.41□□□□□ -1.22
PTPRD-204ENST00000397606 HAS2Q92819 552 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 MCHR2Q969V1 340 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 CLCC1Q96S66 551 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 PDCD1LG2Q9BQ51 273 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 C1QTNF6Q9BXI9 259 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ADAM19Q9H013 955 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 METTL9Q9H1A3 318 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 PARD6AQ9NPB6 346 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 KCNIP1Q9NZI2 227 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 KCNE5Q9UJ90 142 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF222Q9UK12 451 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 RCE1Q9Y256 329 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 TECTAO75443 2155 aa7.41□□□□□ -1.22
PTPRD-204ENST00000397606 TRAV18A0A075B6X5 111 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 A6NHS1 94 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 KLF7O75840 302 aaPredicted RBP7.4□□□□□ -1.22
PTPRD-204ENST00000397606 BMP5P22003 454 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 CDKN2AP42771 156 aaKnown RBP7.4□□□□□ -1.22
PTPRD-204ENST00000397606 SMCO1Q147U7 214 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 PYHIN1Q6K0P9 492 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 PIAS4Q8N2W9 510 aaPredicted RBP7.4□□□□□ -1.22
PTPRD-204ENST00000397606 FDCSPQ8NFU4 85 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 OR8D4Q8NGM9 314 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 HGDQ93099 445 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms