RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 HTR2CP28335 458 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 KIR3DL2P43630 455 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 IGLV3-21P80748 117 aaPredicted RBP9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 DCDP81605 110 aaKnown RBP9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 SGCBQ16585 318 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 COX15Q7KZN9 410 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 MSANTD3Q96H12 275 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZC3HAV1LQ96H79 300 aaKnown RBP9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 OR8B4Q96RC9 309 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 JAM3Q9BX67 310 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 ACTR6Q9GZN1 396 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 GAREM1Q9H706 876 aa9.39□□□□□ -0.91
CPSF1P1-201ENST00000397477 CEP250Q9BV73 2442 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZSCAN5BA6NJL1 495 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 CELA2AP08217 269 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RAB40ALP0C0E4 278 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 BTCP35070 178 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 SLC25A1P53007 311 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 HSF1Q00613 529 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ACY1Q03154 408 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 C17orf67Q0P5P2 114 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 BAIAP2L2Q6UXY1 529 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 UEVLDQ8IX04 471 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 BOLLQ8N9W6 283 aaKnown RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RAB40AQ8WXH6 277 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 DDIT4LQ96D03 193 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 UBL7Q96S82 380 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 IFT46Q9NQC8 304 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RDH8Q9NYR8 311 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 OR52A1Q9UKL2 312 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 C13orf42A0A1B0GVH6 325 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 CENPBD1B2RD01 187 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RGS11O94810 467 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 BGLAPP02818 100 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 CLPSP04118 112 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 IGKV3-11P04433 115 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF43P17038 809 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 DPP4P27487 766 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 SLC26A5P58743 744 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 C19orf57Q0VDD7 668 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 IL10RAQ13651 578 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 GRK1Q15835 563 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 METTL11BQ5VVY1 283 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 H1FNTQ75WM6 255 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 MIB2Q96AX9 1013 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 HAVCR1Q96D42 359 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 NMNAT2Q9BZQ4 307 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF436Q9C0F3 470 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 EVA1AQ9H8M9 152 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 TRAPPC6AO75865 159 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 MPIG6BO95866 241 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 WDPCPO95876 746 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 KLK3P07288 261 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 GABRA4P48169 554 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RPS4XP62701 263 aaKnown RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 KLF9Q13886 244 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RSPO4Q2I0M5 234 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 NLRC3Q7RTR2 1065 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ARMC10Q8N2F6 343 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF501Q96CX3 271 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 WDR89Q96FK6 387 aaPredicted RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 CCDC120Q96HB5 630 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 NARS2Q96I59 477 aaKnown RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 RBM24Q9BX46 236 aaKnown RBP9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 GHITMQ9H3K2 345 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 PRDM6Q9NQX0 595 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 SRPK3Q9UPE1 567 aa9.38□□□□□ -0.91
CPSF1P1-201ENST00000397477 MUC22E2RYF6 1773 aaPredicted RBP9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 LOC101059948A0A1B0GTJ6 334 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 CIB4A0PJX0 185 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 SULT2B1O00204 365 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 PLPP3O14495 311 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 CCSO14618 274 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 SC5DO75845 299 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF35P13682 527 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 AKR1C4P17516 323 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 ARFRP1Q13795 201 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 BCL2A1Q16548 175 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 EXOSC6Q5RKV6 272 aaKnown RBP9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 CD276Q5ZPR3 534 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 IDO2Q6ZQW0 420 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 MAP6Q96JE9 813 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 MRPL22Q9NWU5 206 aaKnown RBP9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 ASH2LQ9UBL3 628 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 FBXL2Q9UKC9 423 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 CACNA1GO43497 2377 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 PHYHO14832 338 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 RGS13O14921 159 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 SLC22A5O76082 557 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF432O94892 652 aa9.37□□□□□ -0.91
CPSF1P1-201ENST00000397477 GGTLC2Q14390 218 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms