RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CACNA1CQ13936 2221 aa24.2■■□□□ 1.47
CPNE1-203ENST00000397442 TTLL8A6PVC2 850 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 E9PI62 339 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 ABHD16AO95870 558 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 LSM6P62312 80 aaKnown RBP24.2■■□□□ 1.46
CPNE1-203ENST00000397442 EGR3Q06889 387 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 DCXRQ7Z4W1 244 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 CLVS1Q8IUQ0 354 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-203ENST00000397442 ASB17Q8WXJ9 295 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 PELI1Q96FA3 418 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 ZNF416Q9BWM5 594 aa24.2■■□□□ 1.46
CPNE1-203ENST00000397442 KRT33AO76009 404 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 GTF2A1P52655 376 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-203ENST00000397442 FOXG1P55316 489 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-203ENST00000397442 BDH1Q02338 343 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 FOXF2Q12947 444 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 ENDOGQ14249 297 aaKnown RBP24.19■■□□□ 1.46
CPNE1-203ENST00000397442 STK11Q15831 433 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 DOLPP1Q86YN1 238 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 RNF166Q96A37 237 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-203ENST00000397442 MAP6Q96JE9 813 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 FOXB1Q99853 325 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 TTYH2Q9BSA4 534 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 CDADC1Q9BWV3 514 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 ACOXLQ9NUZ1 547 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 SLCO1C1Q9NYB5 712 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 GNG8Q9UK08 70 aa24.19■■□□□ 1.46
CPNE1-203ENST00000397442 SIRT4Q9Y6E7 314 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-203ENST00000397442 HOXD4P09016 255 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-203ENST00000397442 OR8G3PP0DMU2 310 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 CD36P16671 472 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 CPEP16870 476 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 GUCA1AP43080 201 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-203ENST00000397442 SIRPAP78324 504 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 ROM1Q03395 351 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 TPBGQ13641 420 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 FAM27BQ5VT28 67 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 C3P1Q6ZMU1 363 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 PLEKHG7Q6ZR37 379 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 ATCAYQ86WG3 371 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 PHC2Q8IXK0 858 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 ZFP41Q8N8Y5 198 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 MRPL48Q96GC5 212 aaKnown RBP24.18■■□□□ 1.46
CPNE1-203ENST00000397442 OR8B4Q96RC9 309 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 MALT1Q9UDY8 824 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 EMC9Q9Y3B6 208 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 CCRL2O00421 344 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 SLC19A2O60779 497 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 TMCC2O75069 709 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 SULT1C4O75897 302 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 EDN3P14138 238 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 LIPKQ5VXJ0 399 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 TFAP2EQ6VUC0 442 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 SLC16A12Q6ZSM3 486 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 KCTD20Q7Z5Y7 419 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 EGFL6Q8IUX8 553 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 OR52N5Q8NH56 324 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 SIAEQ9HAT2 523 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 ASH2LQ9UBL3 628 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 UPB1Q9UBR1 384 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 GRIP1Q9Y3R0 1128 aa24.18■■□□□ 1.46
CPNE1-203ENST00000397442 USP24Q9UPU5 2620 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 METTL15A6NJ78 407 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 ZNF587BE7ETH6 402 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 PRRG2O14669 202 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 B4GALT1P15291 398 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 NPR2P20594 1047 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 FBXW9Q5XUX1 488 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 LRRN1Q6UXK5 716 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 CFAP77Q6ZQR2 320 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 OR10S1Q8NGN2 331 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 MYCBPQ99417 103 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-203ENST00000397442 TP63Q9H3D4 680 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-203ENST00000397442 TRIM36Q9NQ86 728 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 GDF2Q9UK05 429 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-203ENST00000397442 POLR1DQ9Y2S0 133 aa24.17■■□□□ 1.46
CPNE1-203ENST00000397442 TNFSF13O75888 250 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 TIMP3P35625 211 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 CAPZA2P47755 286 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 FAPQ12884 760 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 VWA1Q6PCB0 445 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 ANKRD13BQ86YJ7 626 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 UBE2J2Q8N2K1 259 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 CNEP1R1Q8N9A8 125 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 DGCR14Q96DF8 476 aaKnown RBP24.16■■□□□ 1.46
CPNE1-203ENST00000397442 NDUFB11Q9NX14 153 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 IKZF2Q9UKS7 526 aa24.16■■□□□ 1.46
CPNE1-203ENST00000397442 PNMA8CA0A1B0GUJ8 204 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 KRT8P05787 483 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 LIPNQ5VXI9 398 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 KCTD18Q6PI47 426 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-203ENST00000397442 SPATC1Q76KD6 591 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ZNF627Q7L945 461 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ZNF679Q8IYX0 411 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 LRRC18Q8N456 261 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 NAXEQ8NCW5 288 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 OR6K3Q8NGY3 331 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 RNF133Q8WVZ7 376 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 ISOC1Q96CN7 298 aa24.15■■□□□ 1.46
CPNE1-203ENST00000397442 CNTNAP3BQ96NU0 1288 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms