RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HTR1AP08908 422 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 HOXB1P14653 301 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 B4GALT1P15291 398 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 BMP5P22003 454 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 EGR3Q06889 387 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 EIF2B1Q14232 305 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 IRF3Q14653 427 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 OR7E24Q6IFN5 339 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 SLC16A14Q7RTX9 510 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 GABRG1Q8N1C3 465 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF610Q8N9Z0 462 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 OR1K1Q8NGR3 316 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 OR52N1Q8NH53 320 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 HAVCR2Q8TDQ0 301 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 ASB5Q8WWX0 329 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 SGCDQ92629 289 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 BOD1Q96IK1 185 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 TBX5Q99593 518 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 OPN3Q9H1Y3 402 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 C1orf198Q9H425 327 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 EMC7Q9NPA0 242 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 GALNT8Q9NY28 637 aa20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 CAB39Q9Y376 341 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-202ENST00000397396 ALOX5APP20292 161 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 IGHV1-2P23083 117 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 HOXC12P31275 282 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 PIGFQ07326 219 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 SCRN3Q0VDG4 424 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 SLC36A2Q495M3 483 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 C1QTNF12Q5T7M4 302 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 RHOUQ7L0Q8 258 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 KCTD20Q7Z5Y7 419 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF843Q8N446 348 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 C17orf78Q8N4C9 275 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 GJC3Q8NFK1 279 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 SNX33Q8WV41 574 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 ALG8Q9BVK2 526 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF416Q9BWM5 594 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 ASH2LQ9UBL3 628 aa20.69■□□□□ 0.9
TSPAN4-202ENST00000397396 CIB4A0PJX0 185 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 EEF1E1-BLOC1S5C9J1V9 151 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 EEF1E1O43324 174 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 CLPTM1O96005 669 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 SMIM18P0DKX4 95 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 ATP6V1B1P15313 513 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 CHRNB4P30926 498 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 ENDOGQ14249 297 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 SLC25A35Q3KQZ1 300 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 C4orf17Q53FE4 359 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 C9orf135Q5VTT2 229 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 KLHL24Q6TFL4 600 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF322Q6U7Q0 402 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 PLEKHG7Q6ZR37 379 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 FAM220AQ7Z4H9 259 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 SYS1Q8N2H4 156 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 OR52N5Q8NH56 324 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 THEM6Q8WUY1 208 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 USB1Q9BQ65 265 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 HDHD5Q9BXW7 423 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 ELOVL5Q9NYP7 299 aa20.68■□□□□ 0.9
TSPAN4-202ENST00000397396 RP1L1Q8IWN7 2480 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 A8MXE2 369 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 UBL3O95164 117 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 SCG5P05408 212 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 LIMS3P0CW19 117 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 LIMS4P0CW20 117 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 ETV1P50549 477 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 WNT4P56705 351 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF85Q03923 595 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 MRPL28Q13084 256 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF367Q7RTV3 350 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 DCXRQ7Z4W1 244 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 LHFPL3Q86UP9 236 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 FJX1Q86VR8 437 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 LRRC18Q8N456 261 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 ZNF433Q8N7K0 673 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 NANOGP1Q8N7R0 232 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 ABHD6Q9BV23 337 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 OBP2BQ9NPH6 170 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 ACOT13Q9NPJ3 140 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 GDF2Q9UK05 429 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 COPS3Q9UNS2 423 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 LHFPL6Q9Y693 200 aa20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 PRRC2CQ9Y520 2896 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-202ENST00000397396 SULT1C4O75897 302 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 SEC14L2O76054 403 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 KRT8P05787 483 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 TACSTD2P09758 323 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 GNLYP22749 145 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 PAX7P23759 505 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 EMX1Q04741 257 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 CDONQ4KMG0 1287 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 DEGS2Q6QHC5 323 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 KCTD8Q6ZWB6 473 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 LINC00346Q8IVM7 164 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 PRR7Q8TB68 274 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 LRRC46Q96FV0 321 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 MROQ9BYG7 248 aa20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 MOV10Q9HCE1 1003 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-202ENST00000397396 JKAMPQ9P055 326 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms