RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CPOQ8IVL8 374 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 PAQR4Q8N4S7 273 aaPredicted RBP9.18□□□□□ -0.94
NUP98-205ENST00000397007 RFLNBQ8N5W9 214 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 AMELYQ99218 206 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 B3GAT2Q9NPZ5 323 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 RAB26Q9ULW5 256 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 A6NNC1 897 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 SLC16A7O60669 478 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 ALOX5APP20292 161 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 DCTDP32321 178 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 MST1LQ2TV78 715 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 CARD17Q5XLA6 110 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 CXXC5Q7LFL8 322 aaKnown RBP9.18□□□□□ -0.94
NUP98-205ENST00000397007 MDP1Q86V88 176 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 OR2T4Q8NH00 348 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 PLEKHB1Q9UF11 243 aaPredicted RBP9.18□□□□□ -0.94
NUP98-205ENST00000397007 WARS2Q9UGM6 360 aaKnown RBP9.18□□□□□ -0.94
NUP98-205ENST00000397007 FAM183AA6NL82 134 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 SERPINA5P05154 406 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 RPL4P36578 427 aaKnown RBP9.18□□□□□ -0.94
NUP98-205ENST00000397007 WNT5AP41221 380 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 BLVRAP53004 296 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 SLC35F1Q5T1Q4 408 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 MEDAGQ5VYS4 303 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 PLBD1Q6P4A8 553 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 CYB561A3Q8NBI2 242 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 OTOSQ8NHW6 89 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 PAK1IP1Q9NWT1 392 aaPredicted RBP9.18□□□□□ -0.94
NUP98-205ENST00000397007 COPS3Q9UNS2 423 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 LRRC42Q9Y546 428 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 SPTA1P02549 2419 aa9.18□□□□□ -0.94
NUP98-205ENST00000397007 ALPK2Q86TB3 2170 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 J3QW42 95 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 CECR9P0C854 216 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 PRF1P14222 555 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 ARR3P36575 388 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 ZNF85Q03923 595 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 PPA1Q15181 289 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 FBXW10Q5XX13 1052 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SLC16A9Q7RTY1 509 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 CYGBQ8WWM9 190 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SPSB4Q96A44 273 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SLC38A2Q96QD8 506 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SH3GL3Q99963 347 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 C1QTNF5Q9BXJ0 243 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 TRIM64CA6NLI5 447 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 EEF1E1-BLOC1S5C9J1V9 151 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 EEF1E1O43324 174 aaKnown RBP9.17□□□□□ -0.94
NUP98-205ENST00000397007 RAD51DO75771 328 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP98-205ENST00000397007 TLE4Q04727 773 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 CD47Q08722 323 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 CDK5R2Q13319 367 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 FDX2Q6P4F2 183 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 GID4Q8IVV7 300 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SLC24A3Q9HC58 644 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 UBAP1Q9NZ09 502 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 KIF17Q9P2E2 1029 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 OTOGQ6ZRI0 2925 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 MPZL2O60487 215 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 ENTPD6O75354 484 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 RENP00797 406 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 HTR1AP08908 422 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 DBTP11182 482 aaKnown RBP9.17□□□□□ -0.94
NUP98-205ENST00000397007 ENTPD1P49961 510 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 MEP1BQ16820 701 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
NUP98-205ENST00000397007 TCEANCQ8N8B7 351 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 RBP7Q96R05 134 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 MNTQ99583 582 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 YIPF3Q9GZM5 350 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 RASSF1Q9NS23 344 aa9.17□□□□□ -0.94
NUP98-205ENST00000397007 PRR14LQ5THK1 2151 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 IGHV2OR16-5A0A0B4J2B6 119 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 OVOL3O00110 214 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 DANCRP0C864 163 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 CD40P25942 277 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 VHLP40337 213 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 GLO1Q04760 184 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 SPOCK1Q08629 439 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 SWI5Q1ZZU3 235 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 ZNF771Q7L3S4 317 aaPredicted RBP9.16□□□□□ -0.94
NUP98-205ENST00000397007 SSX6Q7RTT6 188 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 OR9Q1Q8NGQ5 310 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 IPCEF1Q8WWN9 437 aaPredicted RBP9.16□□□□□ -0.94
NUP98-205ENST00000397007 HTRA1Q92743 480 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 RIBC2Q9H4K1 309 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 LSM2Q9Y333 95 aaKnown RBP9.16□□□□□ -0.94
NUP98-205ENST00000397007 IGLV3-9A0A075B6K5 115 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 RIIAD1A6NNX1 92 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 H3BN98 237 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 H3BSA7 217 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 IFNGP01579 166 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 SBK2P0C263 348 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 ZNF32P17041 273 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 PYCR1P32322 319 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 NAAAQ02083 359 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 RAB35Q15286 201 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 DNM1P34Q6PK57 102 aa9.16□□□□□ -0.94
NUP98-205ENST00000397007 DNM1P46Q6ZS02 220 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms