RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NRSN2Q9GZP1 204 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.41
NUP98-204ENST00000397004 DCDC2BA2VCK2 349 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 CDC14CA4D256 554 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 SRPX2O60687 465 aaPredicted RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 AMY2AP04746 511 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 AVPR2P30518 371 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 NTSR1P30989 418 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 SRSF4Q08170 494 aaKnown RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 OR52W1Q6IF63 320 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 ZNF627Q7L945 461 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 CD163Q86VB7 1156 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 PPP1R1CQ8WVI7 109 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 ZNF416Q9BWM5 594 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 COMMD4Q9H0A8 199 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 CST11Q9H112 138 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 CNR1P21554 472 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 CAPZA1P52907 286 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 PPIAP62937 165 aaKnown RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 C1orf61Q13536 156 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 MANEAQ5SRI9 462 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 C9orf50Q5SZB4 431 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 PARGQ86W56 976 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 BEST3Q8N1M1 668 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 MRPL48Q96GC5 212 aaKnown RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 CCDC3Q9BQI4 270 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 GLS2Q9UI32 602 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 PCP4L1A6NKN8 68 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 LINC01565O15544 149 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 PMS2P2O95744 297 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 BGLAPP02818 100 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 ZNF117Q03924 483 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 C11orf87Q6NUJ2 197 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 Q6ZSR6 202 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 RHOUQ7L0Q8 258 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 TMEM151BQ8IW70 566 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 ADAD2Q8NCV1 583 aaKnown RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 PTPMT1Q8WUK0 201 aaPredicted RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 C15orf40Q8WUR7 153 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
NUP98-204ENST00000397004 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
NUP98-204ENST00000397004 VPS13AQ96RL7 3174 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 IGLV1-36A0A0B4J1U3 117 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 MPTX1A8MV57 137 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 SULT2B1O00204 365 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 CD74P04233 296 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 CA3P07451 260 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 HLA-DOBP13765 273 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 IL11P20809 199 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 PBX2P40425 430 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 PPP1R1AQ13522 171 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 PUSL1Q8N0Z8 303 aaKnown RBP12.5□□□□□ -0.41
NUP98-204ENST00000397004 RNF128Q8TEB7 428 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 GTF2A1LQ9UNN4 478 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 WDR87Q6ZQQ6 2873 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 OR6C76A6NM76 312 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 ACTL6AO96019 429 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 HOXB2P14652 356 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 ZBTB25P24278 435 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 MAOBP27338 520 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 SPOCK1Q08629 439 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 KRT77Q7Z794 578 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 KDM8Q8N371 416 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 TAS2R3Q9NYW6 316 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 KLF8O95600 359 aaPredicted RBP12.5□□□□□ -0.41
NUP98-204ENST00000397004 MC2RQ01718 297 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 RASGEF1BQ0VAM2 473 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 PMPCAQ10713 525 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 SCGB2B2Q4G0G5 96 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 SHEQ5VZ18 495 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 GPBAR1Q8TDU6 330 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 PRTFDC1Q9NRG1 225 aa12.5□□□□□ -0.41
NUP98-204ENST00000397004 KLF2Q9Y5W3 355 aaPredicted RBP12.5□□□□□ -0.41
NUP98-204ENST00000397004 CDC40O60508 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUP98-204ENST00000397004 ICOSLGO75144 302 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 UTS2O95399 124 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 BDKRB2P30411 391 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 SLC37A1P57057 533 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 GPM6BQ13491 265 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 TAF13Q15543 124 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 UNQ6126/PRO20091Q6UXV3 157 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 LDLRAD3Q86YD5 345 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ZNF679Q8IYX0 411 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ZNF519Q8TB69 540 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ROBO4Q8WZ75 1007 aa12.49□□□□□ -0.41
NUP98-204ENST00000397004 ADOQ96SZ5 270 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms