RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 LSM6P62312 80 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 MRPL28Q13084 256 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 DCXRQ7Z4W1 244 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 PRSS35Q8N3Z0 413 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 HAVCR2Q8TDQ0 301 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 COQ7Q99807 217 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 TTYH2Q9BSA4 534 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 SLIRPQ9GZT3 109 aaKnown RBP11.22□□□□□ -0.61
TRIM39-204ENST00000396548 GP6Q9HCN6 339 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 EMC7Q9NPA0 242 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 CAMK2AQ9UQM7 478 aa11.22□□□□□ -0.61
TRIM39-204ENST00000396548 A0A1W2PPL8 197 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 RPL36A-HNRNPH2H7BZ11 118 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 GABRPO00591 440 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 YES1P07947 543 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 TACSTD2P09758 323 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF823P16415 610 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 TUBA1BP68363 451 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 STK11Q15831 433 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 CFAP77Q6ZQR2 320 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 TUBA1AQ71U36 451 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 LINC00346Q8IVM7 164 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 OR6N1Q8NGY5 312 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 CPT1CQ8TCG5 803 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 RGP1Q92546 391 aaPredicted RBP11.21□□□□□ -0.61
TRIM39-204ENST00000396548 GHSRQ92847 366 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 TMED9Q9BVK6 235 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
TRIM39-204ENST00000396548 DCSTAMPQ9H295 470 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 NELFAQ9H3P2 528 aa11.21□□□□□ -0.61
TRIM39-204ENST00000396548 ZNHIT1O43257 154 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 MRPS34P82930 218 aaKnown RBP11.21□□□□□ -0.62
TRIM39-204ENST00000396548 DEGS2Q6QHC5 323 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 RHOUQ7L0Q8 258 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 HTRA1Q92743 480 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 PPIL3Q9H2H8 161 aaKnown RBP11.21□□□□□ -0.62
TRIM39-204ENST00000396548 EXO5Q9H790 373 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 SSR3Q9UNL2 185 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 LRP12Q9Y561 859 aa11.21□□□□□ -0.62
TRIM39-204ENST00000396548 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 A0A1B0GTH9 108 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 KRT8P05787 483 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 TRAM1Q15629 374 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 CORO6Q6QEF8 472 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 UNQ9370/PRO34162Q6UXP9 181 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 YIPF7Q8N8F6 280 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 TSC22D3Q99576 134 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 MED18Q9BUE0 208 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 SIAEQ9HAT2 523 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ELOVL3Q9HB03 270 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 GPR35Q9HC97 309 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 EMC3Q9P0I2 261 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 NOSIPQ9Y314 301 aaKnown RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 CACNA1AO00555 2505 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 OR14I1A6ND48 311 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 RGS9O75916 674 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 PNPP00491 289 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 HLA-DPB1P04440 258 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 GDI2P50395 445 aaKnown RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 C22orf42Q6IC83 251 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ARL9Q6T311 187 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 IL17RDQ8NFM7 739 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ABHD4Q8TB40 342 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 GPR137Q96N19 417 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF416Q9BWM5 594 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 HDHD5Q9BXW7 423 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 CRLF2Q9HC73 371 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF254O75437 659 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 MSR1P21757 451 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 KIR3DL2P43630 455 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 SLC3A1Q07837 685 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ALKBH1Q13686 389 aaKnown RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 TSPO2Q5TGU0 170 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 FAM27BQ5VT28 67 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF627Q7L945 461 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 NUFIP2Q7Z417 695 aaKnown RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 OR2G2Q8NGZ5 317 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 TMEM38BQ9NVV0 291 aa11.2□□□□□ -0.62
TRIM39-204ENST00000396548 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 GDF2Q9UK05 429 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-204ENST00000396548 SLC22A20A6NK97 555 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 OR4C45A6NMZ5 311 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 ZFPL1O95159 310 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 AGTR1P30556 359 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 DCTDP32321 178 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 KCTD18Q6PI47 426 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-204ENST00000396548 TEX19Q8NA77 164 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 TBC1D15Q8TC07 691 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 SLAMF6Q96DU3 332 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 BARHL1Q9BZE3 327 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 SEC61A2Q9H9S3 476 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms