RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TLCD1Q96CP7 247 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 CPPED1Q9BRF8 314 aaPredicted RBP14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 MAN2C1Q9NTJ4 1040 aa14.78□□□□□ -0.04
EXOSC3-202ENST00000396521 F13BP05160 661 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 CST2P09228 141 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 SGCAQ16586 387 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 ESCO2Q56NI9 601 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 SPATA46Q5T0L3 261 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 C9orf139Q6ZV77 190 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 MUC20Q8N307 709 aaPredicted RBP14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 NPEPL1Q8NDH3 523 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 NABP1Q96AH0 204 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 NMD3Q96D46 503 aaKnown RBP14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 C4orf45Q96LM5 186 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 MAGEB18Q96M61 343 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 COG8Q96MW5 612 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 RBP7Q96R05 134 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 ALG12Q9BV10 488 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 OR2H1Q9GZK4 316 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 MS4A7Q9GZW8 240 aaPredicted RBP14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 NANOGQ9H9S0 305 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 MEPEQ9NQ76 525 aaPredicted RBP14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 MMP26Q9NRE1 261 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 OR5V1Q9UGF6 321 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 IL19Q9UHD0 177 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 EGFL7Q9UHF1 273 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 NDRG4Q9ULP0 352 aaKnown RBP14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 UGT2A1Q9Y4X1 527 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 MMP24Q9Y5R2 645 aa14.77□□□□□ -0.05
EXOSC3-202ENST00000396521 HMGB1P1B2RPK0 211 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 TIMM8AO60220 97 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 SASH3O75995 380 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 OR7A10O76100 309 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 TSPAN19P0C672 248 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 THRBP10828 461 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 MDH2P40926 338 aaKnown RBP14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 IDH3AP50213 366 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 BTG1P62324 171 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 CD47Q08722 323 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 AGKQ53H12 422 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 ZNF362Q5T0B9 420 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 FAM205BPQ63HN1 556 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 DPP10Q8N608 796 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 VANGL1Q8TAA9 524 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 GEMIN6Q8WXD5 167 aaKnown RBP14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 SGTBQ96EQ0 304 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 PRSS27Q9BQR3 290 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 TXNIPQ9H3M7 391 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 NPHS2Q9NP85 383 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 TBCCD1Q9NVR7 557 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 LRCH1Q9Y2L9 728 aa14.76□□□□□ -0.05
EXOSC3-202ENST00000396521 A0A0G2JK05 382 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 C12orf71A8MTZ7 269 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 TRAPPC2LH3BP13 241 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 SLC2A10O95528 541 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 COX5BP10606 129 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 CDAP32320 146 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 PCGF2P35227 344 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 AQP2P41181 271 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 BPIFB3P59826 476 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 PAX8Q06710 450 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 HSP90B2PQ58FF3 399 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 TTMPQ5BVD1 217 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 KLF17Q5JT82 389 aaPredicted RBP14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 BTNL3Q6UXE8 466 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 LRRN1Q6UXK5 716 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 RFPL4BQ6ZWI9 263 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 RBM45Q8IUH3 476 aaKnown RBP14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 OR52E2Q8NGJ4 325 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 AKR7LQ8NHP1 331 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 TSPEARQ8WU66 669 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 THOC1Q96FV9 657 aaKnown RBP14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 C1orf147Q96MC9 270 aaPredicted RBP14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 DCLRE1CQ96SD1 692 aaKnown RBP14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 CGREF1Q99674 301 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 MSL2Q9HCI7 577 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 ZNF446Q9NWS9 450 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 PPP1R3CQ9UQK1 317 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 NDUFAF1Q9Y375 327 aa14.75□□□□□ -0.05
EXOSC3-202ENST00000396521 F5H0A9 414 aaPredicted RBP14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 FSTL3O95633 263 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 OPN1SWP03999 348 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 ERVK-25P63136 954 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 PSG7Q13046 419 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 SLC9A3R2Q15599 337 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 SLC27A4Q6P1M0 643 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 LEG1Q6P5S2 330 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 C16orf87Q6PH81 154 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 SLC25A47Q6Q0C1 308 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 CCDC80Q76M96 950 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 DHDDSQ86SQ9 333 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 OR4D11Q8NGI4 311 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 TMEM239Q8WW34 195 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 WNT5BQ9H1J7 359 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 KAT8Q9H7Z6 458 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 BAG5Q9UL15 447 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 MED31Q9Y3C7 131 aa14.74□□□□□ -0.05
EXOSC3-202ENST00000396521 ANGPT2O15123 496 aa14.73□□□□□ -0.05
EXOSC3-202ENST00000396521 OR5F1O95221 314 aa14.73□□□□□ -0.05
EXOSC3-202ENST00000396521 NGFP01138 241 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms