RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SMARCB1Q12824 385 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ASAH1Q13510 395 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ABRAXAS2Q15018 415 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 P2RY6Q15077 328 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 GUK1Q16774 197 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 PDZD11Q5EBL8 140 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 LPCAT4Q643R3 524 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 TRIM40Q6P9F5 258 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 Q6ZT83 130 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 STOX1Q6ZVD7 989 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 FBXO16Q8IX29 292 aaPredicted RBP4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF114Q8NC26 417 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 OR4D10Q8NGI6 311 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 C11orf45Q8TAV5 145 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 FNDC8Q8TC99 324 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 SFXN5Q8TD22 340 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 DYNLL2Q96FJ2 89 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ADTRPQ96IZ2 230 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ADGRG7Q96K78 797 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF488Q96MN9 340 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 SORT1Q99523 831 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 FOXC2Q99958 501 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 METTL9Q9H1A3 318 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF385DQ9H6B1 395 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 NT5DC2Q9H857 520 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ZBTB20Q9HC78 741 aaPredicted RBP4.12□□□□□ -1.75
GABPB1-204ENST00000396464 C6orf50Q9HD87 102 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 PLCXD1Q9NUJ7 323 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 INTS9Q9NV88 658 aaKnown RBP4.12□□□□□ -1.75
GABPB1-204ENST00000396464 FGFR1OP2Q9NVK5 253 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 TAS2R7Q9NYW3 318 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 KLK11Q9UBX7 282 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 STOML2Q9UJZ1 356 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF337Q9Y3M9 751 aa4.12□□□□□ -1.75
GABPB1-204ENST00000396464 PRXQ9BXM0 1461 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 EFCAB5A4FU69 1503 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 IGLV3-22A0A075B6J6 115 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 A0A0B4J2E0 115 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 A0A1B0GX12 115 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 RPS10-NUDT3A0A1W2PQS6 291 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF233A6NK53 670 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 RNF212BA8MTL3 300 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF487B1APH4 448 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 H7C0C1 242 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 MRPS12O15235 138 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 BUB3O43684 328 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 HPGDSO60760 199 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 SYF2O95926 243 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 GCGP01275 180 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 IGHV2-5P01817 119 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 IGHV4-39P01824 125 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 LIPCP11150 499 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 LIFP15018 202 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 RAB4AP20338 218 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 BCL3P20749 454 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 CLIP1P30622 1438 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 ELK3P41970 407 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 TSFMP43897 325 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 ATP4BP51164 291 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 STXBP1P61764 594 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 HMGCS1Q01581 520 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 AESQ08117 197 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 STX4Q12846 297 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 MLLT11Q13015 90 aaPredicted RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 PDIA2Q13087 525 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 NFATC4Q14934 902 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 ZIC1Q15915 447 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 VAX1Q5SQQ9 334 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 GPRC6AQ5T6X5 926 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 CPTPQ5TA50 214 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 CEP162Q5TB80 1403 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 AWAT2Q6E213 333 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 FRMPD2BQ6IN97 320 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 APOOLQ6UXV4 268 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 BBS7Q8IWZ6 715 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF740Q8NDX6 193 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 KLHDC9Q8NEP7 349 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 OR5L1Q8NGL2 311 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 OR2G2Q8NGZ5 317 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 OR2AE1Q8NHA4 323 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 SPATA3Q8NHX4 192 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 DYNC2LI1Q8TCX1 351 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 GATAD1Q8WUU5 269 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 TFB1MQ8WVM0 346 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 TCTEX1D2Q8WW35 142 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 AP3S1Q92572 193 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 CMTM7Q96FZ5 175 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 WFIKKN1Q96NZ8 548 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 NKX3-1Q99801 234 aaPredicted RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 EBNA1BP2Q99848 306 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 PRRT1Q99946 306 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 MRPL45Q9BRJ2 306 aaKnown RBP4.11□□□□□ -1.75
GABPB1-204ENST00000396464 RDH14Q9HBH5 336 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 CTPS2Q9NRF8 586 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 NDE1Q9NXR1 346 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 EHFQ9NZC4 300 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 GUCA1BQ9UMX6 200 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms