RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RNF24Q9Y225 148 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 P2RY10O00398 339 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SOCS7O14512 581 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 IGLV3-25P01717 112 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CLEC3BP05452 202 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 HOXD12P35452 270 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CLN3Q13286 438 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SYT14P1Q58G82 188 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SOHLH1Q5JUK2 328 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CD276Q5ZPR3 534 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 DLEU7Q6UYE1 221 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RETREG3Q86VR2 466 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 LGI3Q8N145 548 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OR1E3Q8WZA6 343 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OR2A14Q96R47 310 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 GALNT9Q9HCQ5 603 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 NDUFB11Q9NX14 153 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 KCNG2Q9UJ96 466 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 A0A087WZY1 265 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 AIPO00170 330 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SH2D1BO14796 132 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SELENOFO60613 162 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CNIH1O95406 144 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 HPNP05981 417 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OMGP23515 440 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ARNTP27540 789 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 UBE2G2P60604 165 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 FAPQ12884 760 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 EBPQ15125 230 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 SLC35G3Q8N808 338 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 MRGPRX1Q96LB2 322 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 MMP17Q9ULZ9 603 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 UBR3Q6ZT12 1888 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ARPC4-TTLL3A0A0A6YYG9 625 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 A0A0B4J2A0 478 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TEX51A0A1B0GUA7 166 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RPS10-NUDT3A0A1W2PQS6 291 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 H7C1C5 153 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 HS3ST1O14792 307 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TAAR5O14804 337 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OIP5O43482 229 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SOD1P00441 154 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 GRPP07492 148 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RPS10P46783 165 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 CCR9P51686 369 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF85Q03923 595 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RTL8BQ17RB0 113 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OGFOD3Q6PK18 319 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 LSRQ86X29 649 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 EGFL6Q8IUX8 553 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF687Q8N1G0 1237 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 PXT1Q8NFP0 134 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ATOH1Q92858 354 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 TEX37Q96LM6 180 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 LANCL2Q9NS86 450 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SHPKQ9UHJ6 478 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CA5BQ9Y2D0 317 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SULT1C4O75897 302 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 BTG1P62324 171 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 RAC1P63000 192 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 C1orf87Q8N0U7 546 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF775Q96BV0 537 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 BSCL2Q96G97 398 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PIGMQ9H3S5 423 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HEYLQ9NQ87 328 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF225Q9UK10 706 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FBXL2Q9UKC9 423 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 OR51B4Q9Y5P0 310 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 DTYMKP23919 212 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SSTR2P30874 369 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PMPCAQ10713 525 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 RFLNAQ6ZTI6 216 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 RASD2Q96D21 266 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SEC22AQ96IW7 307 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 Q96M85 177 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SMIM14Q96QK8 99 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 CTRCQ99895 268 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 S1PR5Q9H228 398 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 KIAA1456Q9P272 454 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TIMM10BQ9Y5J6 103 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PPICP45877 212 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HTR4Q13639 388 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PLXDC2Q6UX71 529 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 OR5D18Q8NGL1 313 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 MZB1Q8WU39 189 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 GINS3Q9BRX5 216 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LAT2Q9GZY6 243 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 C12orf49Q9H741 205 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ACER3Q9NUN7 267 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 COA3Q9Y2R0 106 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HDGFL3Q9Y3E1 203 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HSD17B6O14756 317 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FABP7O15540 132 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 XRCC2O43543 280 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HIST1H1CP16403 213 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 RAD52P43351 418 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ARL16Q0P5N6 197 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 NUDT19A8MXV4 375 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 IDSB3KWA1 339 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LINC01387J3KSC0 135 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms