RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PAQR4Q8N4S7 273 aaPredicted RBP13.74□□□□□ -0.21
CPSF7-202ENST00000394888 ASB17Q8WXJ9 295 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 MED29Q9NX70 200 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 A0A1W2PNV4 684 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 TOX3O15405 576 aaPredicted RBP13.74□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF735P0CB33 412 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 CPN1P15169 458 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 IFNGR1P15260 489 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 CXCL2P19875 107 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 H2BFSP57053 126 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 ADAM8P78325 824 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 THAP3Q8WTV1 239 aaPredicted RBP13.74□□□□□ -0.21
CPSF7-202ENST00000394888 EMC3Q9P0I2 261 aa13.74□□□□□ -0.21
CPSF7-202ENST00000394888 PLSCR5A0PG75 271 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF432O94892 652 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 HIST1H2ABP04908 130 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 PUDPQ08623 228 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 HIST3H2AQ7L7L0 130 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF676Q8N7Q3 588 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 MFSD8Q8NHS3 518 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 SAP25Q8TEE9 199 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 HIST1H2ACQ93077 130 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 NOX3Q9HBY0 568 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 ACOT7O00154 380 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 RAMP1O60894 148 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 ECDO95905 644 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-202ENST00000394888 DCNP07585 359 aaKnown RBP13.73□□□□□ -0.21
CPSF7-202ENST00000394888 SPARCP09486 303 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 CCKBRP32239 447 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 EIF2B1Q14232 305 aaKnown RBP13.73□□□□□ -0.21
CPSF7-202ENST00000394888 RABEPKQ7Z6M1 372 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 SPICQ8N5J4 248 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF680Q8NEM1 530 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 GPX8Q8TED1 209 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 METTL17Q9H7H0 456 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF222Q9UK12 451 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 MED12Q93074 2177 aa13.73□□□□□ -0.21
CPSF7-202ENST00000394888 CCL7P80098 99 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 MFAP5Q13361 173 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF431Q8TF32 576 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ACTR6Q9GZN1 396 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 PNRC2Q9NPJ4 139 aaKnown RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 R4GMQ9 66 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 NAP1L6A6NFF2 107 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 E9PLN8 166 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 PNLIPP16233 465 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF17P17021 662 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 MRPL14Q6P1L8 145 aaKnown RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 TSSK4Q6SA08 328 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 LINC00346Q8IVM7 164 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 FAM3DQ96BQ1 224 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 MED30Q96HR3 178 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 CHST6Q9GZX3 395 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 GAREM1Q9H706 876 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF208O43345 1280 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 NUDT14O95848 222 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 EPHA8P29322 1005 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ARRB1P49407 418 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 MRPS10P82664 201 aaKnown RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 NKAIN1Q4KMZ8 207 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 SLC18B1Q6NT16 456 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 CORO6Q6QEF8 472 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 ELMOD2Q8IZ81 293 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 OR6C1Q96RD1 312 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 C1orf198Q9H425 327 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 RANBP3Q9H6Z4 567 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-202ENST00000394888 PROK2Q9HC23 129 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 FBXL2Q9UKC9 423 aa13.72□□□□□ -0.21
CPSF7-202ENST00000394888 AQP8O94778 261 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 GABRA1P14867 456 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 SSTR2P30874 369 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 HIST3H3Q16695 136 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF767PQ75MW2 155 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.71□□□□□ -0.21
CPSF7-202ENST00000394888 WDSUB1Q8N9V3 476 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 RNF133Q8WVZ7 376 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 TTC9Q92623 222 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 PMEPA1Q969W9 287 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 SEH1LQ96EE3 360 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 CYB5R1Q9UHQ9 305 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 LOC400499M0QZD8 3231 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 ARPC4-TTLL3A0A0A6YYG9 625 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 LINC00862A6NCI5 91 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 C1orf100Q5SVJ3 147 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 CDH24Q86UP0 819 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 OR10G3Q8NGC4 313 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 PHF21AQ96BD5 680 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 SOX7Q9BT81 388 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 COMMD4Q9H0A8 199 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 SCP2D1Q9UJQ7 156 aa13.71□□□□□ -0.21
CPSF7-202ENST00000394888 EMC9Q9Y3B6 208 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms