RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PARD6BQ9BYG5 372 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 OR2H1Q9GZK4 316 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 INIPQ9NRY2 104 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 C20orf141Q9NUB4 165 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
CHMP3-202ENST00000393773 EGFL7Q9UHF1 273 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 M0QX08 132 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 OR7A10O76100 309 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 MT-ND1P03886 318 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 SBK2P0C263 348 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 AQP2P41181 271 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 MTPNP58546 118 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 PAX2Q02962 417 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 CDK5R2Q13319 367 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 MTX3Q5HYI7 312 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 FAM27BQ5VT28 67 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 SLC25A47Q6Q0C1 308 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 Q6ZR03 302 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 FOXL2NBQ6ZUU3 175 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 MOSPD2Q8NHP6 518 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 POFUT1Q9H488 388 aa12.92□□□□□ -0.34
CHMP3-202ENST00000393773 SOX21Q9Y651 276 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-202ENST00000393773 TIMM8AO60220 97 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-202ENST00000393773 PLATP00750 562 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 IGF2P01344 180 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 CST2P09228 141 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 PCGF2P35227 344 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 IDH3AP50213 366 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 PAX8Q06710 450 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 CD47Q08722 323 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 PSG7Q13046 419 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 OCLNQ16625 522 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 AGKQ53H12 422 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 ZNF774Q6NX45 483 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 DHDDSQ86SQ9 333 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 LRRC28Q86X40 367 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-202ENST00000393773 NKAIN4Q8IVV8 208 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 TMEM255BQ8WV15 326 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 WFDC12Q8WWY7 111 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 LIPHQ8WWY8 451 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 NSMAFQ92636 917 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-202ENST00000393773 C7orf26Q96N11 449 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 STX18Q9P2W9 335 aaKnown RBP12.91□□□□□ -0.34
CHMP3-202ENST00000393773 OR5V1Q9UGF6 321 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 MMP24Q9Y5R2 645 aa12.91□□□□□ -0.34
CHMP3-202ENST00000393773 MDFIC2A0A1B0GVS7 189 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 TGDSO95455 350 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 PPIAL4GP0DN37 164 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 FUT1P19526 365 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 LAP3P28838 519 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 CD80P33681 288 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 RBM34P42696 430 aaKnown RBP12.9□□□□□ -0.34
CHMP3-202ENST00000393773 MMP16P51512 607 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
CHMP3-202ENST00000393773 ENDOGQ14249 297 aaKnown RBP12.9□□□□□ -0.34
CHMP3-202ENST00000393773 TAF11Q15544 211 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 SGCAQ16586 387 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 PATL1Q86TB9 770 aaKnown RBP12.9□□□□□ -0.34
CHMP3-202ENST00000393773 CLDN22Q8N7P3 220 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 UPRTQ96BW1 309 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 TLCD1Q96CP7 247 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 C4orf45Q96LM5 186 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 SAMD8Q96LT4 415 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 CCDC28BQ9BUN5 200 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-202ENST00000393773 TXNIPQ9H3M7 391 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 NANOGQ9H9S0 305 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 LRCH1Q9Y2L9 728 aa12.9□□□□□ -0.34
CHMP3-202ENST00000393773 IGHV3OR16-10A0A075B7F0 116 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 TRAV40A0A0B4J280 105 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 NR2C1P13056 603 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 TNFRSF1AP19438 455 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 KITLGP21583 273 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 OMGP23515 440 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 MDH2P40926 338 aaKnown RBP12.89□□□□□ -0.35
CHMP3-202ENST00000393773 ARHGDIAP52565 204 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 ESCO2Q56NI9 601 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 JAZF1Q86VZ6 243 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 SLC30A8Q8IWU4 369 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 DPP10Q8N608 796 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 NPEPL1Q8NDH3 523 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 TMIGD2Q96BF3 282 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 CGREF1Q99674 301 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 ALG12Q9BV10 488 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 KAT8Q9H7Z6 458 aaKnown RBP12.89□□□□□ -0.35
CHMP3-202ENST00000393773 ELOVL3Q9HB03 270 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
CHMP3-202ENST00000393773 IGHV2-70DA0A0C4DH43 119 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms