RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 MEGF9Q9H1U4 602 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 SLC6A13Q9NSD5 602 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 TMEM106BQ9NUM4 274 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 CALML5Q9NZT1 146 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 MARCOQ9UEW3 520 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 MIOXQ9UGB7 285 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 FAM96BQ9Y3D0 163 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 CCL27Q9Y4X3 112 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 ARHGAP32A7KAX9 2087 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 CENPVL1A0A0U1RR11 272 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 LOC102725191A0A1B0GVB3 256 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 ANKRD61A6NGH8 418 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 LRRC30A6NM36 301 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 A8MXK9 166 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 RNASET2O00584 256 aaKnown RBP6.59□□□□□ -1.35
CASP4-201ENST00000393150 MGRN1O60291 552 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 PEX11AO75192 247 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 GLRA3O75311 464 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 CPSF4O95639 269 aaKnown RBP6.59□□□□□ -1.35
CASP4-201ENST00000393150 SNAP29O95721 258 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 PLATP00750 562 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 RPS2P15880 293 aaKnown RBP6.59□□□□□ -1.35
CASP4-201ENST00000393150 CD80P33681 288 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 CSNK1A1P48729 337 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 ARHGDIAP52565 204 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 AQP5P55064 265 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 BTG1P62324 171 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 GLO1Q04760 184 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 XKR7Q5GH72 579 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 FAM69AQ5T7M9 428 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 FAM219BQ5XKK7 198 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 C11orf88Q6PI97 169 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 BRD3OSQ6XYD6 125 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 FRRS1Q6ZNA5 592 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 LRRC74BQ6ZQY2 392 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 RNF165Q6ZSG1 346 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 ZNF627Q7L945 461 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 SLC16A14Q7RTX9 510 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 LRRC28Q86X40 367 aaPredicted RBP6.59□□□□□ -1.35
CASP4-201ENST00000393150 CMTM4Q8IZR5 234 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 PQLC1Q8N2U9 271 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 SCCPDHQ8NBX0 429 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 ZBTB34Q8NCN2 500 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 RBM15BQ8NDT2 890 aaKnown RBP6.59□□□□□ -1.35
CASP4-201ENST00000393150 OR8B3Q8NGG8 313 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 PNPT1Q8TCS8 783 aaKnown RBP6.59□□□□□ -1.35
CASP4-201ENST00000393150 OR8B2Q96RD0 313 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 PRDM13Q9H4Q3 707 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 NINJ2Q9NZG7 142 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 CACNG2Q9Y698 323 aa6.59□□□□□ -1.35
CASP4-201ENST00000393150 TENM3Q9P273 2699 aa6.59□□□□□ -1.36
CASP4-201ENST00000393150 PRSS51A0A1B0GVH4 220 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 CLDN24A6NM45 220 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 POLR3GO15318 223 aaPredicted RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 TIMM8AO60220 97 aaPredicted RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 GPR137BO60478 399 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 IGHV1-46P01743 117 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 LIPFP07098 398 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 GKN3PP0CG01 181 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 CPA3P15088 417 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 GYPEP15421 78 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 AHCYP23526 432 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 ARRB2P32121 409 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 GUCA1AP43080 201 aaPredicted RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 ZNF84P51523 738 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 P2RY4P51582 365 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 PROK1P58294 105 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 EMX1Q04741 257 aaPredicted RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 DCTN2Q13561 401 aaKnown RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 PTGR1Q14914 329 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 HERPUD1Q15011 391 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 CHI3L2Q15782 390 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 IL23RQ5VWK5 629 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 HMGN2P46Q86SG4 172 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 SLC22A24Q8N4F4 322 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 C10orf53Q8N6V4 93 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 VANGL1Q8TAA9 524 aaPredicted RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 TWIST2Q8WVJ9 160 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 ZG16BQ96DA0 208 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 SAMD8Q96LT4 415 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 TSPAN32Q96QS1 320 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 NUDT16L1Q9BRJ7 211 aaKnown RBP6.58□□□□□ -1.36
CASP4-201ENST00000393150 FUT8Q9BYC5 575 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 ELOVL3Q9HB03 270 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 CCNB1IP1Q9NPC3 277 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 OAZ3Q9UMX2 235 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 PPP1R3CQ9UQK1 317 aa6.58□□□□□ -1.36
CASP4-201ENST00000393150 TRAV36DV7A0A075B6V5 113 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 IGHV2-70DA0A0C4DH43 119 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 KIR2DS1A0A191URI9 304 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 MDFIC2A0A1B0GVS7 189 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 H3BSA7 217 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 P2RY10O00398 339 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 TM9SF1O15321 606 aa6.57□□□□□ -1.36
CASP4-201ENST00000393150 ENSAO43768 121 aaKnown RBP6.57□□□□□ -1.36
CASP4-201ENST00000393150 BCAS1O75363 584 aaPredicted RBP6.57□□□□□ -1.36
CASP4-201ENST00000393150 TUSC2O75896 110 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms