RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SYT3Q9BQG1 590 aa11.96□□□□□ -0.5
TRAPPC9-201ENST00000389328 SCPEP1Q9HB40 452 aa11.96□□□□□ -0.5
TRAPPC9-201ENST00000389328 PCYT1BQ9Y5K3 369 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR13C7P0DN81 318 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF43P17038 809 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 CTRB1P17538 263 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 DAP3P51398 398 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 DHRS2Q13268 280 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 DMRTC1Q5HYR2 192 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 CTRB2Q6GPI1 263 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR52W1Q6IF63 320 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 LSRQ86X29 649 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 CBLN2Q8IUK8 224 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 ARIH2OSQ8N7S6 290 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 MRGPRX3Q96LB0 322 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 URGCP-MRPS24S4R325 110 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 A0A0B4J2E0 115 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 A0A1B0GX12 115 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 HMSDA8MTL9 139 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 IFNA5P01569 189 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 CHATP28329 748 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 BLVRBP30043 206 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 TANGO2Q6ICL3 276 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 MRM1Q6IN84 353 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR5M9Q8NGP3 310 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 HSD17B8Q92506 261 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 PTGES2Q9H7Z7 377 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 LYRM4Q9HD34 91 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.95□□□□□ -0.51e-8■■■■■ 54.8
TRAPPC9-201ENST00000389328 PTPRZ1P23471 2315 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 SCN3AQ9NY46 2000 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 HLA-DQB1P01920 261 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 GLAP06280 429 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 NR2C1P13056 603 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 CPN1P15169 458 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 ALDH3B1P43353 468 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 SOHLH1Q5JUK2 328 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM69BQ5VUD6 431 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 GALNT16Q8N428 558 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR51Q1Q8NH59 317 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 JAM3Q9BX67 310 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC19A3Q9BZV2 496 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF160Q9HCG1 818 aa11.95□□□□□ -0.5
TRAPPC9-201ENST00000389328 CENPVL1A0A0U1RR11 272 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 CPED1A4D0V7 1026 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 GSTZ1O43708 216 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 B3GALNT1O75752 331 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 IFNA2P01563 188 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 TMIGD3P0DMS9 266 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 NDUFA6P56556 154 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM57BQ71RH2 274 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ADAMTS18Q8TE60 1221 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM96BQ9Y3D0 163 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF831Q5JPB2 1677 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 TRAV36DV7A0A075B6V5 113 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 NME2P1O60361 137 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 GNB3P16520 340 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ALOX5APP20292 161 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF273Q14593 569 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ACKR1Q16570 336 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF595Q8IYB9 648 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR2L13Q8N349 312 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZDHHC12Q96GR4 267 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 RBM24Q9BX46 236 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 LDAHQ9H6V9 325 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 HCRTR1O43613 425 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 HEXBP07686 556 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF44P15621 663 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 BTG2P78543 158 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 LYG2Q86SG7 212 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 COMTD1Q86VU5 262 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 GKN2Q86XP6 184 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR11G2Q8NGC1 345 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 CCDC74AQ96AQ1 378 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 LRFN1Q9P244 771 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 THAP10Q9P2Z0 257 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 PURGQ9UJV8 347 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 PCDHGA5Q9Y5G8 931 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM230AA0A1W2PPH8 454 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 SEMA4FO95754 770 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 RAB5CP51148 216 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 AFF3P51826 1226 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 SNRPEP62304 92 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 MANEAQ5SRI9 462 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 PRSS41Q7RTY9 318 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR4C3Q8NH37 302 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 LRFN5Q96NI6 719 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR5B2Q96R09 309 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 SPACA1Q9HBV2 294 aa11.94□□□□□ -0.5
TRAPPC9-201ENST00000389328 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 TMED7-TICAM2A0A0A6YYA0 188 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 NPIPA2E9PIF3 369 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 NPIPA3F8WFD2 350 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC17A2O00624 439 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms