RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 P2RY1P47900 373 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CSNK1EP49674 416 aaKnown RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 EMP2P54851 167 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 UGT2B15P54855 530 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CDKN2DP55273 166 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 KLF3P57682 345 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 IRX3P78415 501 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ARF5P84085 180 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CDK16Q00536 496 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF92Q03936 586 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 KLRC3Q07444 240 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 FOXF1Q12946 379 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 RPA4Q13156 261 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 RCAN2Q14206 197 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CHRNA6Q15825 494 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 XKR7Q5GH72 579 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TCEAL5Q5H9L2 206 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 THEM4Q5T1C6 240 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 SPECC1LQ69YQ0 1117 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ETFRF1Q6IPR1 90 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 NIPAL3Q6P499 406 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TRIM40Q6P9F5 258 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF322Q6U7Q0 402 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ENPP6Q6UWR7 440 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 FAM131AQ6UXB0 335 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 Q6ZRN7 208 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 PCGF5Q86SE9 256 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 DAZ4Q86SG3 579 aaKnown RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CCDC50Q8IVM0 306 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CCDC170Q8IYT3 715 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CLDN19Q8N6F1 224 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF557Q8N988 423 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 HSD17B11Q8NBQ5 300 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 OR56B1Q8NGI3 324 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 OR2G2Q8NGZ5 317 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF563Q8TA94 476 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 PTP4A1Q93096 173 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TCEAL3Q969E4 200 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TMEM54Q969K7 222 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 NTAN1Q96AB6 310 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 OTUB2Q96DC9 234 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ERP27Q96DN0 273 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TTC25Q96NG3 672 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 MS4A4EQ96PG1 132 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CLCC1Q96S66 551 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TXNDC17Q9BRA2 123 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TUBGCP2Q9BSJ2 902 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TCHPQ9BT92 498 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CHCHD7Q9BUK0 85 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ACAT2Q9BWD1 397 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 XPO4Q9C0E2 1151 aaKnown RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 DPH5Q9H2P9 285 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 NHEJ1Q9H9Q4 299 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 SYTL2Q9HCH5 934 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 DAZ1Q9NQZ3 744 aaKnown RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF302Q9NR11 478 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 RHBDL2Q9NX52 303 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TRMT112Q9UI30 125 aaKnown RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 CHMP2BQ9UQN3 213 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 RASD1Q9Y272 281 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 KCNIP3Q9Y2W7 256 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 TMED5Q9Y3A6 229 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 RPRD2Q5VT52 1461 aaKnown RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 MPDZO75970 2070 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 SPATA31E1Q6ZUB1 1445 aa-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 BRD4O60885 1362 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28-201ENST00000384706 UBE4BO95155 1302 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 ATG2BQ96BY7 2078 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CAMTA1Q9Y6Y1 1673 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 GPR98Q8WXG9 6306 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 KIAA1671Q9BY89 1806 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 A0A0U1RQV5 110 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 SIGLEC16A6NMB1 481 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 GABRR3A8MPY1 467 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 C9JVG2 144 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 NDUFC2-KCTD14E9PQ53 114 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 F6UB75 175 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 POLR2DO15514 142 aaKnown RBP-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF208O43345 1280 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 MED7O43513 233 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CHMP2AO43633 222 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 SSX5O60225 188 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 OR7C2O60412 319 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 PLIN3O60664 434 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 KINO60870 393 aaKnown RBP-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 EIF3GO75821 320 aaKnown RBP eCLIP-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 SLC22A5O76082 557 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CDS2O95674 445 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 AIFM1O95831 613 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 PAHP00439 452 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 MT-ATP6P00846 226 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 IGHV3-11P01762 117 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 IGHV2-5P01817 119 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 KRT14P02533 472 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CD3GP09693 182 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CCDC192P0DO97 292 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CD37P11049 281 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 CCNB1P14635 433 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 PRPS1L1P21108 318 aa-0.07□□□□□ -2.42
SNORD28-201ENST00000384706 MMP11P24347 488 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms