RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 AQP3Q92482 292 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 MRPL53Q96EL3 112 aaKnown RBP-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 C11orf24Q96F05 449 aaPredicted RBP-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 LRRC46Q96FV0 321 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TPD52L3Q96J77 140 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CAPNS2Q96L46 248 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TSSK3Q96PN8 268 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TUBGCP2Q9BSJ2 902 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PAGR1Q9BTK6 254 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 RIOK2Q9BVS4 552 aaKnown RBP-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 MS4A8Q9BY19 250 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 MAGEB5Q9BZ81 275 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 C22orf23Q9BZE7 217 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 SDCBP2Q9H190 292 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PLEKHF2Q9H8W4 249 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 MED17Q9NVC6 651 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ELOVL2Q9NXB9 296 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 RRN3Q9NYV6 651 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 KCND2Q9NZV8 630 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PEMTQ9UBM1 199 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 HSPB7Q9UBY9 170 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 APOBEC2Q9Y235 224 aaKnown RBP-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GTF3C3Q9Y5Q9 886 aa-3.15□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TSPAN11A1L157 253 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 YJEFN3A6XGL0 299 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 ADAMDEC1O15204 470 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 PRAMEF11O60813 436 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 REM1O75628 298 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 IGHV2-70P01814 119 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 GALTP07902 379 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 OR5AC1P0C628 307 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 GCFC2P16383 781 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 NMT1P30419 496 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 SSTR5P35346 364 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 SAA4P35542 130 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 BSGP35613 385 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MTIF2P46199 727 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 RPL27AP46776 148 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 OR3A3P47888 321 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 NCBP2P52298 156 aaKnown RBP eCLIP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 RARSP54136 660 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 TAS2R40P59535 323 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 RPS15AP62244 130 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 DHCR24Q15392 516 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 TNXAQ16473 311 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 ARHGAP11BQ3KRB8 267 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 ZNF678Q5SXM1 525 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 LPCAT4Q643R3 524 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 CES3Q6UWW8 571 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 TMIGD1Q6UXZ0 262 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 RGS9BPQ6ZS82 235 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 FAM231DQ6ZW35 169 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 H2AFVQ71UI9 128 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 PEX5LQ8IYB4 626 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 EID2Q8N6I1 236 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 OR2Z1Q8NG97 314 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 OR10P1Q8NGE3 313 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 OR5B17Q8NGF7 314 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 LYPD6BQ8NI32 183 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 CLUAP1Q96AJ1 413 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 KTI12Q96EK9 354 aaPredicted RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MVB12AQ96EY5 273 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 THOC1Q96FV9 657 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 TMEM80Q96HE8 168 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 RBM41Q96IZ5 413 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 CAPZA3Q96KX2 299 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 KLHDC3Q9BQ90 382 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 ECSITQ9BQ95 431 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 CHCHD6Q9BRQ6 235 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 H2AFJQ9BTM1 129 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MRPS26Q9BYN8 205 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 C20orf85Q9H1P6 137 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MMP27Q9H306 513 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 PLEKHA2Q9HB19 425 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 C20orf141Q9NUB4 165 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MRPL15Q9P015 296 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 KLK9Q9UKQ9 250 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 BAG5Q9UL15 447 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 EMCNQ9ULC0 261 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 A4GNTQ9UNA3 340 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 AAR2Q9Y312 384 aaKnown RBP-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 KLF12Q9Y4X4 402 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 TRAPPC1Q9Y5R8 145 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MAU2Q9Y6X3 613 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 DSCAMO60469 2012 aa-3.16□□□□□ -2.92
RNU6-1340P-201ENST00000384438 CEP170Q5SW79 1584 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 NCOA1Q15788 1441 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 SBF1O95248 1867 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 A0A087WV48 116 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 SMIM9A6NGZ8 99 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 OR5H1A6NKK0 313 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 EFCAB8A8MWE9 144 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 H3BMM5 538 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 IPO8O15397 1037 aaKnown RBP-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 XRCC3O43542 346 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MED24O75448 989 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 SIX3O95343 332 aaPredicted RBP-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 HSPA4LO95757 839 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 CD7P09564 240 aa-3.17□□□□□ -2.92
RNU6-1340P-201ENST00000384438 MYL4P12829 197 aa-3.17□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms