RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 NAMPTP43490 491 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 CRISP3P54108 245 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 VSX2P58304 361 aaPredicted RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 SP4Q02446 784 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 BEX5Q5H9J7 111 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 ARHGAP21Q5T5U3 1957 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 SPESP1Q6UW49 350 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 TIFABQ6ZNK6 161 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 LINC01551Q86U37 167 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 PCP2Q8IVA1 136 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR10G4Q8NGN3 311 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR9G4Q8NGQ1 327 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR5K2Q8NHB8 316 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 GIMAP1Q8WWP7 306 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 SDHCQ99643 169 aaPredicted RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 ZYG11BQ9C0D3 744 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 ELOVL6Q9H5J4 265 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 DDX18Q9NVP1 670 aaKnown RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 PSME2Q9UL46 239 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 TBC1D24Q9ULP9 559 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 ST3GAL6Q9Y274 331 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 PRG3Q9Y2Y8 225 aaPredicted RBP3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 CDC42BPBQ9Y5S2 1711 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 KCNE3Q9Y6H6 103 aa3.57□□□□□ -1.84
RNU6-40P-201ENST00000384254 TTC41PQ6P2S7 1318 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 SPECC1L-ADORA2AF8WAN1 911 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 INS-IGF2F8WCM5 200 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 M0R3G1 203 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 SCAMP2O15127 329 aaKnown RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CDC40O60508 579 aaKnown RBP eCLIP3.56□□□□□ -1.847e-11■■□□□ 11.6
RNU6-40P-201ENST00000384254 CLDN11O75508 207 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CTAG2O75638 210 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 GABARAPO95166 117 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC25A14O95258 325 aaPredicted RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 ARG1P05089 322 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 SERPINE2P07093 398 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 GNAO1P09471 354 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CT45A6P0DMU7 189 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CT45A5P0DMU8 189 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CT45A7P0DMV0 189 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 LONP1P36776 959 aaKnown RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 GPX4P36969 197 aaPredicted RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CCT6AP40227 531 aaKnown RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 ZNF136P52737 540 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CRISP1P54107 249 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 IFT88Q13099 833 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 ERCC8Q13216 396 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 MAB21L1Q13394 359 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 QPRTQ15274 297 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 POU2AF1Q16633 256 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CT45A1Q5HYN5 189 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 TSPO2Q5TGU0 170 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 FAM184AQ8NB25 1140 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CT45A3Q8NHU0 189 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 TMEM230Q96A57 120 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUS3LQ96G46 650 aaKnown RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CEP170P1Q96L14 293 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CLSTN2Q9H4D0 955 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 RETNQ9HD89 108 aa3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 MRPS30Q9NP92 439 aaKnown RBP3.56□□□□□ -1.84
RNU6-40P-201ENST00000384254 CARMIL3Q8ND23 1372 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 MTCL1Q9Y4B5 1905 aaKnown RBP3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 A0A1B0GW55 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 C11orf94C9JXX5 98 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 TEX46H3BTG2 121 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 SPAG7O75391 227 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 HLA-DPB1P04440 258 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4L2P0CJ85 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4L3P0CJ86 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4L5P0CJ88 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4L6P0CJ89 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4L7P0CJ90 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR5H8P0DN80 308 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 PRPS2P11908 318 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 GGT1P19440 569 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 CEACAM3P40198 252 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 UBE2UQ5VVX9 321 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 SPECC1LQ69YQ0 1117 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4L9Q6RFH8 374 aaPredicted RBP3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 ENTHD1Q8IYW4 607 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 ZNF786Q8N393 782 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 STPG2Q8N412 459 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 PQLC3Q8N755 202 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR10J6PQ8NGY7 276 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 NUBPLQ8TB37 319 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 MARCH1Q8TCQ1 289 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 ZFP90Q8TF47 636 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 NTAN1Q96AB6 310 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 LRRC58Q96CX6 371 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 JSRP1Q96MG2 331 aaPredicted RBP3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 UCK2Q9BZX2 261 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 NTN4Q9HB63 628 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 CHRAC1Q9NRG0 131 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 PDP1Q9P0J1 537 aaPredicted RBP3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 DUX4Q9UBX2 424 aa3.55□□□□□ -1.84
RNU6-40P-201ENST00000384254 INSRP06213 1382 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 TRAV25A0A0B4J276 109 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms