RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CYTIPO60759 359 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 JTBO76095 146 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 ZIC2O95409 532 aaPredicted RBP12.81□□□□□ -0.36
SNPH-201ENST00000381867 CPN1P15169 458 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 ITGB8P26012 769 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 HSD17B7P56937 341 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 ZNF92Q03936 586 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 DPPA2Q7Z7J5 298 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 LINC00346Q8IVM7 164 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 LMNTD1Q8N9Z9 388 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 APH1BQ8WW43 257 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 WDR83Q9BRX9 315 aaKnown RBP12.81□□□□□ -0.36
SNPH-201ENST00000381867 HRASLSQ9HDD0 168 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 AKIP1Q9NQ31 210 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TMED7-TICAM2A0A0A6YYA0 188 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 OR6K3Q8NGY3 331 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 MUCL1Q96DR8 90 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 WWTR1Q9GZV5 400 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 SPACA1Q9HBV2 294 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 B3GALT5Q9Y2C3 310 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TMED7Q9Y3B3 224 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
SNPH-201ENST00000381867 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TARM1B6A8C7 271 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 METTL15P1P0C7V9 234 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TCN2P20062 427 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 GABRA2P47869 451 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
SNPH-201ENST00000381867 PDZD11Q5EBL8 140 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TMEM182Q6ZP80 229 aaPredicted RBP12.81□□□□□ -0.36
SNPH-201ENST00000381867 SUMF1Q8NBK3 374 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 OR13H1Q8NG92 308 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TWSG1Q9GZX9 223 aa12.81□□□□□ -0.36
SNPH-201ENST00000381867 TMEM235A6NFC5 223 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 ZNF724A8MTY0 619 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 DOK2O60496 412 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 B4GALT3O60512 393 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 MRPL33O75394 65 aaKnown RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 ACKR3P25106 362 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 GRAMD2AQ8IUY3 354 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 RBMXL3Q8N7X1 1067 aaKnown RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 ZNF845Q96IR2 970 aaPredicted RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 OR6C1Q96RD1 312 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 ACER3Q9NUN7 267 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 CORINQ9Y5Q5 1042 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 C2CD4DB7Z1M9 353 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 HSPB6O14558 160 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 POU3F3P20264 500 aaPredicted RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 BIDP55957 195 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 SLC35A1P78382 337 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 PHLDA2Q53GA4 152 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 CPEB2Q7Z5Q1 589 aaKnown RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 RASD2Q96D21 266 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 ELF4Q99607 663 aaPredicted RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 PDCD1LG2Q9BQ51 273 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 UTP23Q9BRU9 249 aaKnown RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
SNPH-201ENST00000381867 H7BYZ3 331 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 TO15178 435 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 NME2P1O60361 137 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 PRPH2P23942 346 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 CCR2P41597 374 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 SLC48A1Q6P1K1 146 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 RHOUQ7L0Q8 258 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 NAXDQ8IW45 347 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 YIPF6Q96EC8 236 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 TEAD3Q99594 435 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 C12orf57Q99622 126 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 GNG12Q9UBI6 72 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 H7C1Q1 480 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 UTS2O95399 124 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 SBK2P0C263 348 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 CD80P33681 288 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 RAD52P43351 418 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 GZMKP49863 264 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 RAB1AP62820 205 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 GABREP78334 506 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 PYCR3Q53H96 274 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 ZNF620Q6ZNG0 422 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 SYT13Q7L8C5 426 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 OR2L13Q8N349 312 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 LTB4R2Q9NPC1 389 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 NGBQ9NPG2 151 aa12.8□□□□□ -0.36
SNPH-201ENST00000381867 RGS11O94810 467 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 SOD1P00441 154 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 ACHEP22303 614 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 RNF212Q495C1 297 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 KIRREL1Q96J84 757 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 AK3Q9UIJ7 227 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A6P0DMU7 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A5P0DMU8 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A7P0DMV0 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A8P0DMV1 189 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms