RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 C9orf50Q5SZB4 431 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 ATPAF1Q5TC12 328 aaPredicted RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 FNDC7Q5VTL7 733 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 C3orf33Q6P1S2 294 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 CORO6Q6QEF8 472 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 UNQ6126/PRO20091Q6UXV3 157 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 PXT1Q8NFP0 134 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 GPR119Q8TDV5 335 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 GPX8Q8TED1 209 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 ASB5Q8WWX0 329 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 METTL21AQ8WXB1 218 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 MARC2Q969Z3 335 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 LRRC46Q96FV0 321 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 SLC6A7Q99884 636 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 ZNF471Q9BX82 626 aaPredicted RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 TWSG1Q9GZX9 223 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 UBQLN4Q9NRR5 601 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 TAS2R3Q9NYW6 316 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 RABL2AQ9UBK7 228 aaPredicted RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 MSRAQ9UJ68 235 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 KLK13Q9UKR3 277 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 RABL2BQ9UNT1 228 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 MRPS33Q9Y291 106 aaKnown RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 EMC9Q9Y3B6 208 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 H0YIG0 161 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 SLC17A2O00624 439 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 HLA-AP01891 365 aaKnown RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 ITGB2P05107 769 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 CXCR1P25024 350 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 AVPR2P30518 371 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 TNFRSF4P43489 277 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 CAPZA1P52907 286 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 ATP1B3P54709 279 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 GFERP55789 205 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 INSM1Q01101 510 aaPredicted RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 ZP2Q05996 745 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 FMODQ06828 376 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 RASGEF1BQ0VAM2 473 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 BAMBIQ13145 260 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 EIF2B1Q14232 305 aaKnown RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 TMEM151BQ8IW70 566 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 WDFY1Q8IWB7 410 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 IQCF2Q8IXL9 164 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 C7orf61Q8IZ16 206 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 BPIFB2Q8N4F0 458 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 CASTOR1Q8WTX7 329 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 PTPMT1Q8WUK0 201 aaPredicted RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 SLC25A44Q96H78 314 aaPredicted RBP7.85□□□□□ -1.15
TRIM6-203ENST00000380107 OR8B4Q96RC9 309 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 NPAS1Q99742 590 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 MRI1Q9BV20 369 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 SLC19A3Q9BZV2 496 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 SOHLH2Q9NX45 425 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 TAS2R8Q9NYW2 309 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 GMEB2Q9UKD1 530 aa7.85□□□□□ -1.15
TRIM6-203ENST00000380107 RFPL4AA6NLU0 287 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 RFPL4AL1F8VTS6 287 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 POU2F2P09086 479 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 HTR2CP28335 458 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 CTHP32929 405 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 EIF1AXP47813 144 aaKnown RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 STARP49675 285 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 PSMD4P55036 377 aaKnown RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 EGR3Q06889 387 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 PRTGQ2VWP7 1150 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 MANEAQ5SRI9 462 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 TMEM88Q6PEY1 159 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 C16orf47Q6ZP98 133 aaPredicted RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 NAXDQ8IW45 347 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 ABCA7Q8IZY2 2146 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 ESX1Q8N693 406 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 BPIFCQ8NFQ6 507 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 OR13C8Q8NGS7 320 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 OR6K3Q8NGY3 331 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 VRK1Q99986 396 aaPredicted RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 AIFM2Q9BRQ8 373 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 ABHD6Q9BV23 337 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 LDAHQ9H6V9 325 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 VSIG4Q9Y279 399 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 YBX2Q9Y2T7 364 aaKnown RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 TMED7Q9Y3B3 224 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 LRP12Q9Y561 859 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 TMEM131Q92545 1883 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 WIPF3A6NGB9 483 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 DNASE2O00115 360 aaPredicted RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 CYB5AP00167 134 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 HOXC4P09017 264 aaPredicted RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 RPA2P15927 270 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 CALCRP30988 508 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 AKT2P31751 481 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 EFNA3P52797 238 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 SLC37A1P57057 533 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 SKP1P63208 163 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 DLX2Q07687 328 aaPredicted RBP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 PMPCAQ10713 525 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 OR7A5Q15622 319 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRIM6-203ENST00000380107 CDNFQ49AH0 187 aa7.84□□□□□ -1.15
TRIM6-203ENST00000380107 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms