RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NANOGQ9H9S0 305 aa14.96□□□□□ -0.01
PDLIM4-202ENST00000379018 NKIRAS1Q9NYS0 192 aa14.96□□□□□ -0.01
PDLIM4-202ENST00000379018 UGT2A1Q9Y4X1 527 aa14.96□□□□□ -0.01
PDLIM4-202ENST00000379018 NOTCH1P46531 2555 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 TRBV5-3A0A0A0MS03 114 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 ERLIN1O75477 346 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 CD55P08174 381 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 ADH4P08319 380 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 LAP3P28838 519 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 TMEM155Q4W5P6 130 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 AGKQ53H12 422 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 ZNF774Q6NX45 483 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 EPGNQ6UW88 154 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 C17orf107Q6ZR85 190 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 PTOV1Q86YD1 416 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 KIR3DL3Q8N743 410 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 CLDN22Q8N7P3 220 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 SLC26A7Q8TE54 656 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 ZDHHC16Q969W1 377 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 MPP4Q96JB8 637 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 C4orf45Q96LM5 186 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 CCT8L2Q96SF2 557 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 POFUT1Q9H488 388 aa14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 MEPEQ9NQ76 525 aaPredicted RBP14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 CGGBP1Q9UFW8 167 aaPredicted RBP14.95□□□□□ -0.02
PDLIM4-202ENST00000379018 A0A1W2PPL8 197 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 CLDN34H7C241 214 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 HOXA3O43365 443 aaPredicted RBP14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 OR7A10O76100 309 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 ABHD16AO95870 558 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 TNFRSF1AP19438 455 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 FUT1P19526 365 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 CD80P33681 288 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 PCBP3P57721 371 aaKnown RBP14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 MTPNP58546 118 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 PSG7Q13046 419 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 SELPLGQ14242 412 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 C16orf87Q6PH81 154 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 BTNL3Q6UXE8 466 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 LRRC28Q86X40 367 aaPredicted RBP14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 ALDH16A1Q8IZ83 802 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 SGTBQ96EQ0 304 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 EBF4Q9BQW3 602 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 PARD6BQ9BYG5 372 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 ELOVL3Q9HB03 270 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 ZNF446Q9NWS9 450 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 PDP1Q9P0J1 537 aaPredicted RBP14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 PPP1R3CQ9UQK1 317 aa14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 POLR3KQ9Y2Y1 108 aaPredicted RBP14.94□□□□□ -0.02
PDLIM4-202ENST00000379018 DOCK11Q5JSL3 2073 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 CEACAM18A8MTB9 384 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 A8MXK9 166 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 F5H0A9 414 aaPredicted RBP14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 RPS2P15880 293 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 GSTM3P21266 225 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 MDH2P40926 338 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 CDK5R2Q13319 367 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 RUNDC3AQ59EK9 446 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 BRICD5Q6PL45 260 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 BRD3OSQ6XYD6 125 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 ZER1Q7Z7L7 766 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 ZNF283Q8N7M2 679 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 TMEM255BQ8WV15 326 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 WFDC12Q8WWY7 111 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 TAMM41Q96BW9 452 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 SAMD8Q96LT4 415 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 SEPHS2Q99611 448 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 PRSS27Q9BQR3 290 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 ZNF426Q9BUY5 554 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 SSBP3Q9BWW4 388 aaPredicted RBP14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 C20orf141Q9NUB4 165 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 STX18Q9P2W9 335 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 KLHL21Q9UJP4 597 aa14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 PRKDCP78527 4128 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-202ENST00000379018 IGHV3-64DA0A0J9YX35 117 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 FAM181BA6NEQ2 426 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 CENPBD1B2RD01 187 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 SHOX2O60902 331 aaPredicted RBP14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 MT-ND1P03886 318 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 CRYBA1P05813 215 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 VIMP08670 466 aaKnown RBP14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 TNFRSF1BP20333 461 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 GUCA1AP43080 201 aaPredicted RBP14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 ZNF133P52736 654 aaPredicted RBP14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 TAS2R41P59536 307 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 PAX8Q06710 450 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 LAPTM4AQ15012 233 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 ARMC4Q5T2S8 1044 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 C1orf94Q6P1W5 598 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 SLC25A47Q6Q0C1 308 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 Q6ZR03 302 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 DHDDSQ86SQ9 333 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 IGFN1Q86VF2 1251 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 NKAIN4Q8IVV8 208 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 OR5AS1Q8N127 324 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 OR2V2Q96R30 315 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 SIGLEC11Q96RL6 698 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 PKP2Q99959 881 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 MARCH7Q9H992 704 aa14.92□□□□□ -0.02
PDLIM4-202ENST00000379018 TIMM10BQ9Y5J6 103 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms