RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 STRCQ7RTU9 1775 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 PRAMEF25A6NGN4 478 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 C9J4A7 227 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 HCRTR2O43614 444 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 PRAMEF4O60810 478 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 WDR1O75083 606 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 STC2O76061 302 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 MTHFD2P13995 350 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 BMP5P22003 454 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 MEF2DQ14814 521 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 PRAMEF9Q5VWM5 478 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 NIPAL3Q6P499 406 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 CMTM4Q8IZR5 234 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 TNFSF18Q9UNG2 199 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 PAM16Q9Y3D7 125 aa10.77□□□□□ -0.68
NPHP4-202ENST00000378161 CLDN34H7C241 214 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 MAN2B1O00754 1011 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 JTBO76095 146 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 IMPA1P29218 277 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 BIDP55957 195 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 MIDNQ504T8 468 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 LDLRAD2Q5SZI1 272 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 C22orf39Q6P5X5 142 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TEX26Q8N6G2 289 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 MDGA1Q8NFP4 955 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 OR4D6Q8NGJ1 314 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 NKD1Q969G9 470 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 PRRT1Q99946 306 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 BOCQ9BWV1 1114 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 SLC23A2Q9UGH3 650 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 V9GY05 133 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 NUP205Q92621 2012 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF840PA6NDX5 716 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 DOK2O60496 412 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF865P0CJ78 1059 aaPredicted RBP10.77□□□□□ -0.69
NPHP4-202ENST00000378161 MRPL49Q13405 166 aaKnown RBP10.77□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF813Q6ZN06 617 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 CPOQ8IVL8 374 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 OR11G2Q8NGC1 345 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TSEN15Q8WW01 171 aaKnown RBP10.77□□□□□ -0.69
NPHP4-202ENST00000378161 SLC35E1Q96K37 410 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 DPH1Q9BZG8 443 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 LPAR2Q9HBW0 351 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 CKLFQ9UBR5 152 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 MRPS33Q9Y291 106 aaKnown RBP10.77□□□□□ -0.69
NPHP4-202ENST00000378161 GBAP04062 536 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 RBMXP38159 391 aaKnown RBP10.77□□□□□ -0.69
NPHP4-202ENST00000378161 ARL4DP49703 201 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TAS2R31P59538 309 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 OR8G2PQ6IF36 304 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF774Q6NX45 483 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM150AQ86TG1 271 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM37Q8WXS4 190 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 THAP4Q8WY91 577 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 EDAQ92838 391 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 NKX3-1Q99801 234 aaPredicted RBP10.77□□□□□ -0.69
NPHP4-202ENST00000378161 SLC12A9Q9BXP2 914 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 GPR62Q9BZJ7 368 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 PRODH2Q9UF12 536 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 NAGKQ9UJ70 344 aa10.77□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3DA0A087WVF3 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3IA0A087WXS9 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3EA0A087X179 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3LB9A6J9 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 CYC1P08574 325 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 HSD11B1P28845 292 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 PMELP40967 661 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 ATP1B3P54709 279 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 WNT3P56703 355 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SHC2P98077 582 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 RAB31Q13636 194 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3CQ6IPX1 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 Q6ZVU0 165 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3Q8IZP1 549 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 GPX8Q8TED1 209 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 APIPQ96GX9 242 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 LAMP3Q9UQV4 416 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 GSTZ1O43708 216 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 OR7C2O60412 319 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 CD46P15529 392 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SDC1P18827 310 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 EIF2B1Q14232 305 aaKnown RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 ELOA3BQ3SY89 546 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF468Q5VIY5 522 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF322Q6U7Q0 402 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 ELOA3Q8NG57 546 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 OR56A1Q8NGH5 318 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SFXN5Q8TD22 340 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 BTF3L4Q96K17 158 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 ADGRG7Q96K78 797 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 FGF20Q9NP95 211 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 PHPT1Q9NRX4 125 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 MARCH5Q9NX47 278 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SLX4Q8IY92 1834 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms