RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SLC26A5P58743 744 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 RPL27P61353 136 aaKnown RBP12.57□□□□□ -0.4
MSH5-202ENST00000375740 FLI1Q01543 452 aaPredicted RBP12.57□□□□□ -0.4
MSH5-202ENST00000375740 PMS2CLQ68D20 193 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 SLC25A25Q6KCM7 469 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 CCDC74BQ96LY2 380 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 FOXN4Q96NZ1 517 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 DERL3Q96Q80 235 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 B9D1Q9UPM9 204 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 OR6A2O95222 327 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 GDNFP39905 211 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 CENPAP49450 140 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 MMP15P51511 669 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 HES5Q5TA89 166 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 LCN10Q6JVE6 187 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 PAPD4Q6PIY7 484 aaKnown RBP12.56□□□□□ -0.4
MSH5-202ENST00000375740 EID2Q8N6I1 236 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
MSH5-202ENST00000375740 OR5AK2Q8NH90 309 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ZNF671Q8TAW3 534 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 SCARB1Q8WTV0 552 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 APMAPQ9HDC9 416 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ANKRD10Q9NXR5 420 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 SUSD2Q9UGT4 822 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 RCE1Q9Y256 329 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ARPC4-TTLL3A0A0A6YYG9 625 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 TRBV11-1A0A0K0K1C0 115 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 TMEM200CA6NKL6 621 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 PLPP3O14495 311 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 AHSA1O95433 338 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ANXA7P20073 488 aaKnown RBP12.56□□□□□ -0.4
MSH5-202ENST00000375740 RAG2P55895 527 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 PDSS1Q5T2R2 415 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ZNF519Q8TB69 540 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 HAVCR2Q8TDQ0 301 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 STK35Q8TDR2 534 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 AMELYQ99218 206 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 WDR77Q9BQA1 342 aaPredicted RBP12.56□□□□□ -0.4
MSH5-202ENST00000375740 TXNIPQ9H3M7 391 aa12.56□□□□□ -0.4
MSH5-202ENST00000375740 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
MSH5-202ENST00000375740 PRSS37A4D1T9 235 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 UBL3O95164 117 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 HLA-DQA2P01906 255 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 PTHLHP12272 177 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 GABRA1P14867 456 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 IL11P20809 199 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 C17orf67Q0P5P2 114 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 LRRC69Q6ZNQ3 347 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 MISPQ8IVT2 679 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 KDM8Q8N371 416 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 OR52B4Q8NGK2 314 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ZNF417Q8TAU3 575 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 NUBPLQ8TB37 319 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 LGALS14Q8TCE9 139 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 TMEM234Q8WY98 164 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ZNF587Q96SQ5 575 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 MNTQ99583 582 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ARL6Q9H0F7 186 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 MED11Q9P086 117 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ZNF69Q9UC07 566 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 KCNG2Q9UJ96 466 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 VCANP13611 3396 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 CCDC163A0A0D9SF12 145 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ANKRD61A6NGH8 418 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 D6RAR5 112 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 SLC16A7O60669 478 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 B3GALNT1O75752 331 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 GLAP06280 429 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 S100A11P31949 105 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 SOX2P48431 317 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 INSM1Q01101 510 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 DHODHQ02127 395 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 EGR3Q06889 387 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 C2orf68Q2NKX9 166 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 HSD17B13Q7Z5P4 300 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 MAFAQ8NHW3 353 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 NSMAFQ92636 917 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 C8orf44Q96CB5 159 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 TMEM14AQ9Y6G1 99 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ANKUB1A6NFN9 424 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 VSTM2BA6NLU5 285 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 IFITM5A6NNB3 132 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ABCD4O14678 606 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 OR2T1O43869 369 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ITGA10O75578 1167 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 PDGFBP01127 241 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 HOXA6P31267 233 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 CCR9P51686 369 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 POLR2GP62487 172 aaKnown RBP eCLIP12.55□□□□□ -0.4
MSH5-202ENST00000375740 Q499Y3 187 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 PABPC1L2AQ5JQF8 200 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 CPEB2Q7Z5Q1 589 aaKnown RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 OR2I1PQ8NGU4 316 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms