RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LRP12Q9Y561 859 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 MRPS18BQ9Y676 258 aaKnown RBP13.08□□□□□ -0.32
MSH5-201ENST00000375703 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 CACNA1CQ13936 2221 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 DCDC2BA2VCK2 349 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 SHISA7A6NL88 538 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 PLPP3O14495 311 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 MPZL1O95297 269 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 MAP2K6P52564 334 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 MELKQ14680 651 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 VWA2Q5GFL6 755 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 PXDC1Q5TGL8 231 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 NAXDQ8IW45 347 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 PRSS58Q8IYP2 241 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 TMEM229BQ8NBD8 167 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 CCDC107Q8WV48 283 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
MSH5-201ENST00000375703 MED9Q9NWA0 146 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 CGGBP1Q9UFW8 167 aaPredicted RBP13.08□□□□□ -0.32
MSH5-201ENST00000375703 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 DOK2O60496 412 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 NPIPB7O75200 414 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 LPLP06858 475 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 CALCRP30988 508 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 BAMBIQ13145 260 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 SLC41A2Q96JW4 573 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 POTEKPQ9BYX7 375 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 OR11A1Q9GZK7 315 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 CHRNA10Q9GZZ6 450 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 MYEF2Q9P2K5 600 aaKnown RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 PFDN2Q9UHV9 154 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 TCRBV16S1A1N1A0A5B0 115 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 PMS2P2O95744 297 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 OR4E1P0C645 316 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 NME1P15531 152 aaKnown RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 ZP3P21754 424 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 ABCD3P28288 659 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 CRABP1P29762 137 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 DNASE1L1P49184 302 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 EFNA3P52797 238 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 SORDQ00796 357 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 TAGLNQ01995 201 aaKnown RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 GLO1Q04760 184 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 GK2Q14410 553 aaPredicted RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 DEFB133Q30KQ1 61 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 LRFN4Q6PJG9 635 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 SLC29A4Q7RTT9 530 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 KDM8Q8N371 416 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 FAM174AQ8TBP5 190 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 GPR119Q8TDV5 335 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 ZNF587Q96SQ5 575 aaPredicted RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 CMKLR1Q99788 373 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 WWTR1Q9GZV5 400 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 PPA2Q9H2U2 334 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 C1orf198Q9H425 327 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
MSH5-201ENST00000375703 COPS7AQ9UBW8 275 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 EMC9Q9Y3B6 208 aa13.07□□□□□ -0.32
MSH5-201ENST00000375703 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 TMEM82A0PJX8 343 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 M0QYG6 137 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 TO15178 435 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 MELTFP08582 738 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 TUSC1Q2TAM9 212 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 C12orf45Q8N5I9 185 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 ZNF454Q8N9F8 522 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 ZNF248Q8NDW4 579 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 OR6M1Q8NGM8 313 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 OR13C3Q8NGS6 347 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 OR52N5Q8NH56 324 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 SLC25A21Q9BQT8 299 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 TPSD1Q9BZJ3 242 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 TINAGL1Q9GZM7 467 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 MFFQ9GZY8 342 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 ZMAT3Q9HA38 289 aaKnown RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 HHLA2Q9UM44 414 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 MEGF11A6BM72 1044 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 AHSA1O95433 338 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 AMY2AP04746 511 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 ZNF823P16415 610 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 CD38P28907 300 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 LTBRP36941 435 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
MSH5-201ENST00000375703 ARL4DP49703 201 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 SPOCK1Q08629 439 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 GRINAQ7Z429 371 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 MVB12AQ96EY5 273 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 SLC2A4RGQ9NR83 387 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms