RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RAB3AP20336 220 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 CNR1P21554 472 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 GPR3P46089 330 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 PSMD4P55036 377 aaKnown RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 SCAND1P57086 179 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 STARD6P59095 220 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 TAS2R19P59542 299 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 EGR3Q06889 387 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 MOGAT2Q3SYC2 334 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 PARGQ86W56 976 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 TSTD1Q8NFU3 115 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 CCDC107Q8WV48 283 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 WNT2BQ93097 391 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 OR10A5Q9H207 317 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 TCEAL2Q9H3H9 227 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 HPF1Q9NWY4 346 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 CPNE7Q9UBL6 633 aa12.72□□□□□ -0.37
CLCNKA-202ENST00000375692 A0A0D9SG52 128 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 KANTRA0A1W2PQU2 76 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 DCDC2BA2VCK2 349 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 WISP1O95388 367 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 RENP00797 406 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 DMDP11532 3685 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 APEHP13798 732 aaKnown RBP12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 ATP1B3P54709 279 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 SQSTM1Q13501 440 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 ALG11Q2TAA5 492 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 GLT8D1Q68CQ7 371 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM88Q6PEY1 159 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 MED25Q71SY5 747 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 DGAT2Q96PD7 388 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC6A7Q99884 636 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 SLC6A15Q9H2J7 730 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 EPHA6Q9UF33 1036 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 PLEKHA6Q9Y2H5 1048 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 NOP16Q9Y3C1 178 aaKnown RBP12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 MRPS18BQ9Y676 258 aaKnown RBP12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 FRYLO94915 3013 aa12.71□□□□□ -0.37
CLCNKA-202ENST00000375692 FITM1A5D6W6 292 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 FAM25EA8MYX2 175 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 TXNDC12O95881 172 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 CELA2BP08218 269 aaPredicted RBP12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF735P0CB33 412 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 HPGDP15428 266 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 CD34P28906 385 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 ACTBP60709 375 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 ACTG1P63261 375 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 FAM166AQ6J272 317 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 CD163Q86VB7 1156 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 OR51A2Q8NGJ7 313 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 OTOSQ8NHW6 89 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 ADAT1Q9BUB4 502 aaKnown RBP12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 POTEKPQ9BYX7 375 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 TAS2R4Q9NYW5 299 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 UPB1Q9UBR1 384 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 GPN3Q9UHW5 284 aaPredicted RBP12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 TNFSF18Q9UNG2 199 aa12.71□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC25A12O75746 678 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 CD8AP01732 235 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 GP1BAP07359 652 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 GUSBP08236 651 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 PNMTP11086 282 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 TACR3P29371 465 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM225Q6GV28 225 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 C11orf87Q6NUJ2 197 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 BPIFB2Q8N4F0 458 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM229BQ8NBD8 167 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 AVL9Q8NBF6 648 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 OR13C8Q8NGS7 320 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 CLDN16Q9Y5I7 305 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 A0A1B0GTI1 187 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 RNF222A6NCQ9 220 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 MPTX1A8MV57 137 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 GPR31O00270 319 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 SPARCP09486 303 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 IFI6P09912 130 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 HNRNPA2B1P22626 353 aaKnown RBP12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 AGTR1P30556 359 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 CAPZA1P52907 286 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 SKP2Q13309 424 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 PABPC1L2AQ5JQF8 200 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 MANEAQ5SRI9 462 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 CLVS2Q5SYC1 327 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 C3orf33Q6P1S2 294 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM17Q86X19 198 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF321PQ8N8H1 164 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 ZSCAN1Q8NBB4 408 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 OR1S2Q8NGQ3 325 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF563Q8TA94 476 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 NKD1Q969G9 470 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms