RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 LAMP3Q9UQV4 416 aa13.85□□□□□ -0.19
HDHD3-202ENST00000374180 OTOGQ6ZRI0 2925 aa13.85□□□□□ -0.19
HDHD3-202ENST00000374180 FAM171A2A8MVW0 826 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 GPANK1O95872 356 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 DANCRP0C864 163 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 ZNF35P13682 527 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 ZNF3P17036 446 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 LSM6P62312 80 aaKnown RBP13.84□□□□□ -0.19
HDHD3-202ENST00000374180 ELF3P78545 371 aaPredicted RBP13.84□□□□□ -0.19
HDHD3-202ENST00000374180 CDK5Q00535 292 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 PSG4Q00888 419 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 HGFACQ04756 655 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 CRMP1Q14194 572 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 KCNMB1Q16558 191 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 DEFB113Q30KQ7 82 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 OTPQ5XKR4 325 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 PARP8Q8N3A8 854 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 OR2T4Q8NH00 348 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 TMEM171Q8WVE6 324 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 C11orf40Q8WZ69 217 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 MBD6Q96DN6 1003 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 RBM4Q9BWF3 364 aaKnown RBP13.84□□□□□ -0.19
HDHD3-202ENST00000374180 OR2H1Q9GZK4 316 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 GABARAPL1Q9H0R8 117 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 SPEF1Q9Y4P9 236 aa13.84□□□□□ -0.19
HDHD3-202ENST00000374180 SAC3D1A6NKF1 404 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 HLA-DQA2P01906 255 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 HMGN1P05114 100 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 SOD3P08294 240 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 APEX1P27695 318 aaKnown RBP13.83□□□□□ -0.2
HDHD3-202ENST00000374180 APOBEC3AP31941 199 aaPredicted RBP13.83□□□□□ -0.2
HDHD3-202ENST00000374180 TTKP33981 857 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 APLNRP35414 380 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 CRISP1P54107 249 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 ESRRGP62508 458 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 GALK2Q01415 458 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 AGAP6Q5VW22 663 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 TMEM236Q5W0B7 351 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 KDM4DQ6B0I6 523 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 ZNF544Q6NX49 715 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 VHLLQ6RSH7 139 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.83□□□□□ -0.2
HDHD3-202ENST00000374180 FBXL14Q8N1E6 418 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 CPEB3Q8NE35 698 aaKnown RBP13.83□□□□□ -0.2
HDHD3-202ENST00000374180 OR9Q1Q8NGQ5 310 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 OR1J2Q8NGS2 313 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 AKR7LQ8NHP1 331 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 STMN2Q93045 179 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 OTULINQ96BN8 352 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 WNT5BQ9H1J7 359 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 CA10Q9NS85 328 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 BEX4Q9NWD9 120 aaPredicted RBP13.83□□□□□ -0.2
HDHD3-202ENST00000374180 POLR1DQ9Y2S0 133 aa13.83□□□□□ -0.2
HDHD3-202ENST00000374180 USF3Q68DE3 2245 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 VSTM5A8MXK1 200 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 MITFO75030 526 aaPredicted RBP13.82□□□□□ -0.2
HDHD3-202ENST00000374180 GAAP10253 952 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 CCL2P13500 99 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 PAICSP22234 425 aaKnown RBP13.82□□□□□ -0.2
HDHD3-202ENST00000374180 NR4A1P22736 598 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 STOMP27105 288 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 PYCR1P32322 319 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 SLC25A1P53007 311 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 TEKQ02763 1124 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 SCRN3Q0VDG4 424 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 AQP6Q13520 282 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 DAG1Q14118 895 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 MEP1BQ16820 701 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 TBC1D28Q2M2D7 210 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 KRT80Q6KB66 452 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 MUC15Q8N387 334 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 NUP37Q8NFH4 326 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 SLC26A10Q8NG04 563 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 OR10H5Q8NGA6 315 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 CDADC1Q9BWV3 514 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 OSBPL10Q9BXB5 764 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 NMNAT2Q9BZQ4 307 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 CXorf56Q9H5V9 222 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 CDH20Q9HBT6 801 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 SLC25A19Q9HC21 320 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 ASH2LQ9UBL3 628 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 ENOPH1Q9UHY7 261 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 ARID1AO14497 2285 aa13.82□□□□□ -0.2
HDHD3-202ENST00000374180 RAI1Q7Z5J4 1906 aaPredicted RBP13.82□□□□□ -0.2
HDHD3-202ENST00000374180 FAM183AA6NL82 134 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 SMPD2O60906 423 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 TFP02787 698 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 CCNOP22674 350 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 IGFBP5P24593 272 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 ART1P52961 327 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 SNTB2Q13425 540 aaKnown RBP13.81□□□□□ -0.2
HDHD3-202ENST00000374180 PTGES3Q15185 160 aaKnown RBP13.81□□□□□ -0.2
HDHD3-202ENST00000374180 ZNF774Q6NX45 483 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 DTX2Q86UW9 622 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 OR51L1Q8NGJ5 315 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 IGFBPL1Q8WX77 278 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 PLEKHA8Q96JA3 519 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 CIB1Q99828 191 aa13.81□□□□□ -0.2
HDHD3-202ENST00000374180 RBM4BQ9BQ04 359 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms