RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GPR3P46089 330 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 IKZF1Q13422 519 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 SYT13Q7L8C5 426 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 CPEB2Q7Z5Q1 589 aaKnown RBP10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 TMEM178AQ8NBL3 297 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 MRGPRX4Q96LA9 322 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 HRH4Q9H3N8 390 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 KCNG2Q9UJ96 466 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 ADAMTSL1Q8N6G6 1762 aa10.8□□□□□ -0.68
DEPDC1-201ENST00000370966 FITM1A5D6W6 292 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SGCEO43556 437 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 DOK2O60496 412 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 FBXO24O75426 580 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SOX18P35713 384 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 C9orf50Q5SZB4 431 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 OR1M1Q8NGA1 313 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 OR10K1Q8NGX5 313 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 C22orf15Q8WYQ4 148 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SERGEFQ9UGK8 458 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 TRAPPC4Q9Y296 219 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 NINQ8N4C6 2090 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 MN1Q10571 1320 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 TRBV5-3A0A0A0MS03 114 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 MSTNO14793 375 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 IFNA17P01571 189 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 IGHA2P01877 340 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 IL32P24001 234 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SLC17A1Q14916 467 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 OR2G2Q8NGZ5 317 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 RNF141Q8WVD5 230 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF681Q96N22 645 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 TSSK2Q96PF2 358 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 OR11A1Q9GZK7 315 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 TAS2R4Q9NYW5 299 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 ASH2LQ9UBL3 628 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SIGLEC7Q9Y286 467 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 CCL27Q9Y4X3 112 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 POM121CA8CG34 1229 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 ARPC3O15145 178 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 BET1O15155 118 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SLC2A1P11166 492 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 EMDP50402 254 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 CAMK2BQ13554 666 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 PRSS36Q5K4E3 855 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 FAM71CQ8NEG0 241 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 S100PBPQ96BU1 408 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 MUCL1Q96DR8 90 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SIGLEC11Q96RL6 698 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 ABHD6Q9BV23 337 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SAV1Q9H4B6 383 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 WSB2Q9NYS7 404 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 CABIN1Q9Y6J0 2220 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 TEX51A0A1B0GUA7 166 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 MED6O75586 246 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 LAP3P28838 519 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 RFX2P48378 723 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 LUMP51884 338 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 CLDN20P56880 219 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 YBX1P67809 324 aaKnown RBP10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 IAH1Q2TAA2 248 aaPredicted RBP10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 SEMA6DQ8NFY4 1073 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 OR52N5Q8NH56 324 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 HSD17B8Q92506 261 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 UPRTQ96BW1 309 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 RAB39BQ96DA2 213 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 OR2A5Q96R48 311 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 PFDN5Q99471 154 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 BCO1Q9HAY6 547 aa10.79□□□□□ -0.68
DEPDC1-201ENST00000370966 A0A0B4J2E0 115 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 A0A1B0GX12 115 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 QDPRP09417 244 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 DRD3P35462 400 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 STAC2Q6ZMT1 411 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 LANCL3Q6ZV70 420 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 CMTM4Q8IZR5 234 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 PIGTQ969N2 578 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 BIN3Q9NQY0 253 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF831Q5JPB2 1677 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 ARFGEF1Q9Y6D6 1849 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 H7C1Q1 480 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 IFNA10P01566 189 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 EPXP11678 715 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 DDOQ99489 341 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 ISG20L2Q9H9L3 353 aaKnown RBP10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 CALHM2Q9HA72 323 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 TRAPPC2LQ9UL33 140 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 GZMKP49863 264 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 USF2Q15853 346 aaPredicted RBP10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 LGI3Q8N145 548 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 SUMF2Q8NBJ7 301 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 OR4Q3Q8NH05 313 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 NKX3-1Q99801 234 aaPredicted RBP10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 JAM3Q9BX67 310 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 CNTNAP3Q9BZ76 1288 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 ZCCHC4Q9H5U6 513 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 SPACA1Q9HBV2 294 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 TMEM100Q9NV29 134 aa10.78□□□□□ -0.68
DEPDC1-201ENST00000370966 PIGLQ9Y2B2 252 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms