RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 XRCC3O43542 346 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 MFAP5Q13361 173 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 MRPL58Q14197 206 aaKnown RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 ATPAF1Q5TC12 328 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 CCDC71Q8IV32 467 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 MISPQ8IVT2 679 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 ZFPM2Q8WW38 1151 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 PIGTQ969N2 578 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 TSSK2Q96PF2 358 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 TNRC6CQ9HCJ0 1690 aaKnown RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 RFPL4AA6NLU0 287 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 RFPL4AL1F8VTS6 287 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 JMJD7P0C870 316 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 DPP4P27487 766 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 FCGR2CP31995 323 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 HTR5AP47898 357 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 HLXQ14774 488 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM41BQ5BJD5 291 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 CLEC1AQ8NC01 280 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 OR1J2Q8NGS2 313 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 PATZ1Q9HBE1 687 aaKnown RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 CDH20Q9HBT6 801 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 SRPK3Q9UPE1 567 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF217O75362 1048 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 LIMS3P0CW19 117 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 LIMS4P0CW20 117 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 SDHBP21912 280 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 IFITM3Q01628 133 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 EGR3Q06889 387 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 OR1S2Q8NGQ3 325 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 MBNL1Q9NR56 388 aaKnown RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 ZFP92A6NM28 416 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 BHLHE40O14503 412 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 NXPH3O95157 252 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 RD3LP0DJH9 198 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 CD22P20273 847 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF133P52736 654 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-202ENST00000369733 HMGA2P52926 109 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 EMC4Q5J8M3 183 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 SPHK1Q9NYA1 384 aa14.54□□□□□ -0.08
COL17A1-202ENST00000369733 VSTM5A8MXK1 200 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 TO15178 435 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 FGF17O60258 216 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 DRD1P21728 446 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 MSR1P21757 451 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 GALP22466 123 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 PCBD1P61457 104 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF684Q5T5D7 378 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 KIAA0895LQ68EN5 471 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF561Q8N587 486 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 NUDCD2Q8WVJ2 157 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 OR51B6Q9H340 312 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF346Q9UL40 294 aaKnown RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 HPNP05981 417 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 OTX2P32243 289 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 RPS27P42677 84 aaKnown RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF239Q16600 458 aaKnown RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 RNF212Q495C1 297 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 OR6K3Q8NGY3 331 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ARHGDIGQ99819 225 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 IL20Q9NYY1 176 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 OTOL1A6NHN0 477 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 AQP8O94778 261 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 SLC2A1P11166 492 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 RAG2P55895 527 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 GUCA2AQ02747 115 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 DPTQ07507 201 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 MANEAQ5SRI9 462 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 RNLSQ5VYX0 342 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM81Q6P7N7 255 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 TOE1Q96GM8 510 aaKnown RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 BTAF1O14981 1849 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 NDUFB6O95139 128 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 H2AFB1P0C5Y9 115 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 HRH1P35367 487 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 MCCD1P59942 119 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ECH1Q13011 328 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF425Q6IV72 752 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 UQCC3Q6UW78 93 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 BHLHA9Q7RTU4 235 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 NAXDQ8IW45 347 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 GALNT16Q8N428 558 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 OR5L1Q8NGL2 311 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 TAAR8Q969N4 342 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 CNRIP1Q96F85 164 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 ABHD6Q9BV23 337 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 MED16Q9Y2X0 877 aa14.53□□□□□ -0.08
COL17A1-202ENST00000369733 AHDC1Q5TGY3 1603 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-202ENST00000369733 HSPB6O14558 160 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 ST8SIA3O43173 380 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM127O75204 238 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 ZFAND5O76080 213 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 RAB11AP62491 216 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 HNF4GQ14541 408 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 TMEM201Q5SNT2 666 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 MAMSTRQ6ZN01 415 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 BPIFCQ8NFQ6 507 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 GPR32P1Q8NGA4 272 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 HPSE2Q8WWQ2 592 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 CMTM3Q96MX0 182 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms