RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CD200R1LQ6Q8B3 271 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 ZNF679Q8IYX0 411 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 YIPF7Q8N8F6 280 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 CPT1CQ8TCG5 803 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 ZNF837Q96EG3 531 aaPredicted RBP21.08■□□□□ 0.96
SNX3-203ENST00000368979 TRMT61AQ96FX7 289 aaKnown RBP21.08■□□□□ 0.96
SNX3-203ENST00000368979 CNTNAP3BQ96NU0 1288 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 CDADC1Q9BWV3 514 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 RBM24Q9BX46 236 aaKnown RBP21.08■□□□□ 0.96
SNX3-203ENST00000368979 CNTNAP3Q9BZ76 1288 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 NELFAQ9H3P2 528 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 LHFPL6Q9Y693 200 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 ANKRD11Q6UB99 2663 aaPredicted RBP21.08■□□□□ 0.96
SNX3-203ENST00000368979 CD53P19397 219 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 MSR1P21757 451 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 TGFBR1P36897 503 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 PSMB10P40306 273 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 LSM6P62312 80 aaKnown RBP21.07■□□□□ 0.96
SNX3-203ENST00000368979 TSPO2Q5TGU0 170 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 RPL22L1Q6P5R6 122 aaKnown RBP21.07■□□□□ 0.96
SNX3-203ENST00000368979 LRRN1Q6UXK5 716 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.07■□□□□ 0.96
SNX3-203ENST00000368979 OR5M9Q8NGP3 310 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 NDNFQ8TB73 568 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 HTRA1Q92743 480 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 TMEM203Q969S6 136 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 PGLYRP3Q96LB9 341 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 CRLF2Q9HC73 371 aa21.07■□□□□ 0.96
SNX3-203ENST00000368979 PTPRQQ9UMZ3 2332 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 LAMA5O15230 3695 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 CD1AP06126 327 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 AGTR1P30556 359 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 MRPS34P82930 218 aaKnown RBP21.06■□□□□ 0.96
SNX3-203ENST00000368979 KRTCAP3Q53RY4 240 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 CORO6Q6QEF8 472 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 ARL9Q6T311 187 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 P4HA3Q7Z4N8 544 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 SMIM19Q96E16 107 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 MAP6Q96JE9 813 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 TRIB1Q96RU8 372 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 TM9SF2Q99805 663 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 DCUN1D5Q9BTE7 237 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 MROQ9BYG7 248 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 RNF167Q9H6Y7 350 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 GPR35Q9HC97 309 aa21.06■□□□□ 0.96
SNX3-203ENST00000368979 OR6C65A6NJZ3 312 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 AHRRA9YTQ3 701 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 SS18L1O75177 396 aaPredicted RBP21.05■□□□□ 0.96
SNX3-203ENST00000368979 GUCA1AP43080 201 aaPredicted RBP21.05■□□□□ 0.96
SNX3-203ENST00000368979 SGCAQ16586 387 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 ACSF3Q4G176 576 aaPredicted RBP21.05■□□□□ 0.96
SNX3-203ENST00000368979 NUFIP2Q7Z417 695 aaKnown RBP21.05■□□□□ 0.96
SNX3-203ENST00000368979 KRT77Q7Z794 578 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 RNF133Q8WVZ7 376 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 GMPPAQ96IJ6 420 aaPredicted RBP21.05■□□□□ 0.96
SNX3-203ENST00000368979 TMED9Q9BVK6 235 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 ELOVL3Q9HB03 270 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 GLRX2Q9NS18 164 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 SLC7A10Q9NS82 523 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 GDF2Q9UK05 429 aaPredicted RBP21.05■□□□□ 0.96
SNX3-203ENST00000368979 SSR3Q9UNL2 185 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 POLR1DQ9Y2S0 133 aa21.05■□□□□ 0.96
SNX3-203ENST00000368979 TMEM8BA6NDV4 472 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 NANOS3P60323 173 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 FABP5Q01469 135 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 ENDOGQ14249 297 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 STK11Q15831 433 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 APH1AQ96BI3 265 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 ZNF416Q9BWM5 594 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 C1orf198Q9H425 327 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 EXOSC4Q9NPD3 245 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 TMEM38BQ9NVV0 291 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 MGAQ8IWI9 3026 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 TRDV1A0A1B0GX56 115 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 RPL36A-HNRNPH2H7BZ11 118 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 ACACBO00763 2458 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 RPP14O95059 124 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 HLA-DPB1P04440 258 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 IGF2RP11717 2491 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 ZNF182P17025 639 aaPredicted RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 GALP22466 123 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 UGT2B10P36537 528 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 GDI2P50395 445 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 TDGF1P3P51864 188 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 ROR2Q01974 943 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 SLC3A1Q07837 685 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 CEACAM16Q2WEN9 425 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 DEGS2Q6QHC5 323 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 CFAP77Q6ZQR2 320 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 SPATC1Q76KD6 591 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 OR10S1Q8NGN2 331 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 OR2AJ1Q8NGZ0 328 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 HSD17B8Q92506 261 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 SLAMF6Q96DU3 332 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 DCLRE1CQ96SD1 692 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 COQ7Q99807 217 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 TXNL4BQ9NX01 149 aaKnown RBP21.04■□□□□ 0.96
SNX3-203ENST00000368979 ASH2LQ9UBL3 628 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 LRP12Q9Y561 859 aa21.04■□□□□ 0.96
SNX3-203ENST00000368979 TRBV2A0A0J9YWF9 115 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms