RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 GNAO1P09471 354 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 SPARCP09486 303 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 PCBD1P61457 104 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 SNRPGP62308 76 aaKnown RBP11.07□□□□□ -0.64
EFNA1-201ENST00000368406 HSF2Q03933 536 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 PIGFQ07326 219 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 GSG1Q2KHT4 349 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 NRN1LQ496H8 165 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 TIMM23BQ5SRD1 257 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 OTPQ5XKR4 325 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 KRT80Q6KB66 452 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 MEPCEQ7L2J0 689 aaKnown RBP11.07□□□□□ -0.64
EFNA1-201ENST00000368406 P2RY8Q86VZ1 359 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 SKA3Q8IX90 412 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 CCDC36Q8IYA8 594 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 OR6N2Q8NGY6 317 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 C11orf40Q8WZ69 217 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 HSD17B8Q92506 261 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 TFAP2CQ92754 450 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 PTP4A1Q93096 173 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 UBE2FQ969M7 185 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 CNBD2Q96M20 576 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF582Q96NG8 517 aaPredicted RBP11.07□□□□□ -0.64
EFNA1-201ENST00000368406 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 INTS14Q96SY0 518 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 DDOQ99489 341 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 RAB26Q9ULW5 256 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.07□□□□□ -0.64
EFNA1-201ENST00000368406 CSMD2Q7Z408 3487 aa11.07□□□□□ -0.64
EFNA1-201ENST00000368406 ABCA4P78363 2273 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 CASKO14936 926 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 TMCC2O75069 709 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 ENTPD6O75354 484 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 HLA-HP01893 362 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 CST2P09228 141 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 GAAP10253 952 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
EFNA1-201ENST00000368406 NAA10P41227 235 aaPredicted RBP11.06□□□□□ -0.64
EFNA1-201ENST00000368406 ENTPD1P49961 510 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 MAD2L1BPQ15013 274 aaPredicted RBP11.06□□□□□ -0.64
EFNA1-201ENST00000368406 LYPD4Q6UWN0 246 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 FOXL2NBQ6ZUU3 175 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF627Q7L945 461 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 DPPA2Q7Z7J5 298 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 SLC26A10Q8NG04 563 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 NABP1Q96AH0 204 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 CNN2Q99439 309 aaKnown RBP11.06□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF416Q9BWM5 594 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 NGBQ9NPG2 151 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 AASSQ9UDR5 926 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 WARS2Q9UGM6 360 aaKnown RBP11.06□□□□□ -0.64
EFNA1-201ENST00000368406 COMMD3-BMI1R4GMX3 469 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 HSPE1-MOB4S4R3N1 261 aa11.06□□□□□ -0.64
EFNA1-201ENST00000368406 ARPC4-TTLL3A0A0A6YYG9 625 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 E9PQ18 207 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 M0R1B8 84 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 PATE4P0C8F1 98 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 SLC2A5P22732 501 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 HTR1FP30939 366 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 ARR3P36575 388 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF83P51522 516 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 NUDT6P53370 316 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 LSM6P62312 80 aaKnown RBP11.05□□□□□ -0.64
EFNA1-201ENST00000368406 PLP2Q04941 152 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 POU4F2Q12837 409 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 AQP6Q13520 282 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 TAB1Q15750 504 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 OCLNQ16625 522 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 FAM27BQ5VT28 67 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 AADACL4Q5VUY2 407 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 TMEM154Q6P9G4 183 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 UGT2A3Q6UWM9 527 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 B3GLCTQ6Y288 498 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 SSX8Q7RTT4 187 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 THAP5Q7Z6K1 395 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 MDP1Q86V88 176 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 OR51G2Q8NGK0 314 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 RHOXF1Q8NHV9 184 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 ZNRF4Q8WWF5 429 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 TEAD3Q99594 435 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 KCNS3Q9BQ31 491 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 C1QTNF6Q9BXI9 259 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 MOV10Q9HCE1 1003 aaKnown RBP11.05□□□□□ -0.64
EFNA1-201ENST00000368406 ASH2LQ9UBL3 628 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
EFNA1-201ENST00000368406 IQCMA0A1B0GVH7 501 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 CCDC182A6NF36 153 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF593O00488 134 aaPredicted RBP11.04□□□□□ -0.64
EFNA1-201ENST00000368406 SELENOFO60613 162 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 TFP02787 698 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 HRGP04196 525 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 SCG5P05408 212 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF32P17041 273 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 MTNR1AP48039 350 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 IDH3GP51553 393 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms