RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ZNF774Q6NX45 483 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 DNM1P46Q6ZS02 220 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 LRP11Q86VZ4 500 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 ZCCHC24Q8N2G6 241 aaKnown RBP12.64□□□□□ -0.39
SF3B5-201ENST00000367569 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 CYB561A3Q8NBI2 242 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 CPEB3Q8NE35 698 aaKnown RBP12.64□□□□□ -0.39
SF3B5-201ENST00000367569 OR52L1Q8NGH7 329 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 OR4Q3Q8NH05 313 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 WNT5BQ9H1J7 359 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
SF3B5-201ENST00000367569 MYEF2Q9P2K5 600 aaKnown RBP12.64□□□□□ -0.39
SF3B5-201ENST00000367569 SERPINA5P05154 406 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 ZNF35P13682 527 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 SERPINF1P36955 418 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 HMGA2P52926 109 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 NUDT6P53370 316 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 SNRPD2P62316 118 aaKnown RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 PSG4Q00888 419 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 C1QTNF12Q5T7M4 302 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 LYPD4Q6UWN0 246 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 FOXL2NBQ6ZUU3 175 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 ADCK1Q86TW2 530 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 ZNF525Q8N782 197 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 NUP37Q8NFH4 326 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 OR4F15Q8NGB8 312 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 OR52E2Q8NGJ4 325 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 OR9Q1Q8NGQ5 310 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 SORCS2Q96PQ0 1159 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 VRK1Q99986 396 aaPredicted RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 MRPL37Q9BZE1 423 aaKnown RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 GRIP2Q9C0E4 1043 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 OR2H1Q9GZK4 316 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 KCNN2Q9H2S1 579 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 TPK1Q9H3S4 243 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 MOV10Q9HCE1 1003 aaKnown RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 SRA1Q9HD15 236 aaKnown RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 VSX1Q9NZR4 365 aaPredicted RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 PDP1Q9P0J1 537 aaPredicted RBP12.63□□□□□ -0.39
SF3B5-201ENST00000367569 POLR1DQ9Y2S0 133 aa12.63□□□□□ -0.39
SF3B5-201ENST00000367569 FBN3Q75N90 2809 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 LOC100509620A0A075B734 347 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 IQCMA0A1B0GVH7 501 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 DOK2O60496 412 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 ENTPD5O75356 428 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 KHDRBS3O75525 346 aaKnown RBP12.62□□□□□ -0.39
SF3B5-201ENST00000367569 TXNDC12O95881 172 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
SF3B5-201ENST00000367569 NPR2P20594 1047 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 PRKACGP22612 351 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 NR4A1P22736 598 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 PYCR1P32322 319 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 APLNRP35414 380 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 PLP2Q04941 152 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 CCNIQ14094 377 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 CARTPTQ16568 116 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 SWI5Q1ZZU3 235 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 TBC1D28Q2M2D7 210 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 C1orf146Q5VVC0 180 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 RFPL4BQ6ZWI9 263 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 OR51L1Q8NGJ5 315 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 C11orf40Q8WZ69 217 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 SLC7A6Q92536 515 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 FEVQ99581 238 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 TSSK6Q9BXA6 273 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 PLK3Q9H4B4 646 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 DYNLRB1Q9NP97 96 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 ASH2LQ9UBL3 628 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 STAB1Q9NY15 2570 aa12.62□□□□□ -0.39
SF3B5-201ENST00000367569 MXRA5Q9NR99 2828 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 IGLV1-36A0A0B4J1U3 117 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 C5orf49A4QMS7 147 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 OR6C68A6NDL8 312 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 BHLHE40O14503 412 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 RENP00797 406 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 GYPBP06028 91 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 LCKP06239 509 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 CST2P09228 141 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 GAAP10253 952 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 STOMP27105 288 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 WNT5AP41221 380 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
SF3B5-201ENST00000367569 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 HTR5AP47898 357 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 SLC36A3Q495N2 470 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 RASSF6Q6ZTQ3 369 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 ZNF101Q8IZC7 436 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 OR6V1Q8N148 313 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 FNDC8Q8TC99 324 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 ZNRF4Q8WWF5 429 aa12.61□□□□□ -0.39
SF3B5-201ENST00000367569 GTF3AQ92664 365 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms