RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 LRP12Q9Y561 859 aa11.11□□□□□ -0.63
PTPN7-202ENST00000367279 TMEM82A0PJX8 343 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 SLC17A2O00624 439 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 LMX1BO60663 402 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 CYB5AP00167 134 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 BGLAPP02818 100 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 PPP3CBP16298 524 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 SLC6A8P48029 635 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 INSM1Q01101 510 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-202ENST00000367279 TAF13Q15543 124 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 ADGRG3Q86Y34 549 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 ZNF248Q8NDW4 579 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 MCHR2Q969V1 340 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 MICU1Q9BPX6 476 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 SLC7A5P2Q9GIP4 190 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 MRPL22Q9NWU5 206 aaKnown RBP11.1□□□□□ -0.63
PTPN7-202ENST00000367279 VDAC3Q9Y277 283 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 AUP1Q9Y679 476 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 MED12Q93074 2177 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 ABCA7Q8IZY2 2146 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 A0A1W2PPC4 97 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 SIGLEC5O15389 551 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 ALOX12BO75342 701 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 TXNDC12O95881 172 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 GUSBP08236 651 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 SIGLEC14Q08ET2 396 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 FAM74A1Q5RGS3 127 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 SLC29A4Q7RTT9 530 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 OR6N1Q8NGY5 312 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 PLEKHA6Q9Y2H5 1048 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 ARID1AO14497 2285 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 BLACEA4D250 179 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 FRG2CA6NGY1 282 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 P2RY10O00398 339 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 OR2A4O95047 310 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 DMWDQ09019 674 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 CDNFQ49AH0 187 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 C1orf140Q5VVS0 124 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 PRSS42Q7Z5A4 293 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 COMMD2Q86X83 199 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 GKN2Q86XP6 184 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 BPIFB2Q8N4F0 458 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 C12orf45Q8N5I9 185 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-202ENST00000367279 STEAP2Q8NFT2 490 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 OR2A7Q96R45 310 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 POTEKPQ9BYX7 375 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 TMEM185BQ9H7F4 350 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 LANCL2Q9NS86 450 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 KIF25Q9UIL4 384 aa11.1□□□□□ -0.63
PTPN7-202ENST00000367279 NMBP08949 121 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ACHEP22303 614 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ACTBP60709 375 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ACTG1P63261 375 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 HDDC2Q7Z4H3 204 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 DCXRQ7Z4W1 244 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 C9orf40Q8IXQ3 194 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 OR6M1Q8NGM8 313 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 OR1J2Q8NGS2 313 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 CMBLQ96DG6 245 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 NARS2Q96I59 477 aaKnown RBP11.09□□□□□ -0.63
PTPN7-202ENST00000367279 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-202ENST00000367279 NUDT22Q9BRQ3 303 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 EXOSC3Q9NQT5 275 aaKnown RBP11.09□□□□□ -0.63
PTPN7-202ENST00000367279 UPB1Q9UBR1 384 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 MRPS18BQ9Y676 258 aaKnown RBP11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ZNF736B4DX44 427 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-202ENST00000367279 H0YIG0 161 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 H3BML4 177 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 OR4E1P0C645 316 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 OR1D5P58170 312 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 TAS2R19P59542 299 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 GLO1Q04760 184 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 OR7A5Q15622 319 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 MOGAT2Q3SYC2 334 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 LANCL3Q6ZV70 420 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ZNF546Q86UE3 836 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 RNF128Q8TEB7 428 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 SCARB1Q8WTV0 552 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 CCDC107Q8WV48 283 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ASB5Q8WWX0 329 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 MNTQ99583 582 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 ADAM19Q9H013 955 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 LRP4O75096 1905 aa11.09□□□□□ -0.63
PTPN7-202ENST00000367279 TMEM269A0A1B0GVZ9 245 aa11.08□□□□□ -0.64
PTPN7-202ENST00000367279 TLCD2A6NGC4 264 aa11.08□□□□□ -0.64
PTPN7-202ENST00000367279 NPIPA5E9PKD4 350 aa11.08□□□□□ -0.64
PTPN7-202ENST00000367279 DDAH2O95865 285 aa11.08□□□□□ -0.64
PTPN7-202ENST00000367279 FBLP22087 321 aaKnown RBP11.08□□□□□ -0.64
PTPN7-202ENST00000367279 ARHGDIBP52566 201 aa11.08□□□□□ -0.64
PTPN7-202ENST00000367279 EPHA4P54764 986 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms