RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ORMDL2Q53FV1 153 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR13G1Q8NGZ3 307 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 OR1P1Q8NH06 330 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 SHC3Q92529 594 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 STMN2Q93045 179 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 TBC1D31Q96DN5 1066 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 SERPINB12Q96P63 405 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 GON7Q9BXV9 100 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 VCX2Q9H322 139 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 GORASP2Q9H8Y8 452 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 TMED5Q9Y3A6 229 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 UBIAD1Q9Y5Z9 338 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 LTBP4Q8N2S1 1624 aa1.97□□□□□ -2.09
RNU4-28P-201ENST00000364739 H0YCG3 227 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 H0YJW9 148 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 SOX15O60248 233 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 CLIC3O95833 236 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR8U9P0C7N5 309 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 P0C880 135 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF735P0CB33 412 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 RAB3BP20337 219 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 PRMT2P55345 433 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 UBE2HP62256 183 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 IL15RAQ13261 267 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 PDK3Q15120 406 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 TAF9Q16594 264 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 EID2Q8N6I1 236 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 METTL13Q8N6R0 699 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 TRPV1Q8NER1 839 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR1S2Q8NGQ3 325 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR6N1Q8NGY5 312 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 CXorf40AQ8TE69 158 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 LHX5Q9H2C1 402 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 DHX35Q9H5Z1 703 aaKnown RBP1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 DHCR7Q9UBM7 475 aaKnown RBP1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF391Q9UJN7 358 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 PEX16Q9Y5Y5 336 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 MYO16Q9Y6X6 1858 aa1.96□□□□□ -2.1
RNU4-28P-201ENST00000364739 C15orf38-AP3S2A0A0A6YYH1 394 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 C16orf90A8MZG2 172 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 POLR1CO15160 346 aaPredicted RBP1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 CHST1O43916 411 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 TMEM50AO95807 157 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 CD74P04233 296 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR5H8P0DN80 308 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF250P15622 560 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 TGFBR1P36897 503 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 IFNAR2P48551 515 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 RND2P52198 227 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 AIF1P55008 147 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 SLC16A13Q7RTY0 426 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 H2BFWTQ7Z2G1 175 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 EFL1Q7Z2Z2 1120 aaKnown RBP1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 LRRC75A-AS1Q8N1F1 130 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 TMEM105Q8N8V8 129 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 RHEBL1Q8TAI7 183 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 SLC25A46Q96AG3 418 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 FGF23Q9GZV9 251 aaPredicted RBP1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 KLHL28Q9NXS3 571 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF639Q9UID6 485 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 ING4Q9UNL4 249 aa1.95□□□□□ -2.1
RNU4-28P-201ENST00000364739 IGKV2-24A0A0C4DH68 120 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 A0A1W2PPE3 182 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 GPR89AB7ZAQ6 455 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 L7N2F9 121 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 SOCS1O15524 211 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 IL1BP01584 269 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 GPR89BP0CG08 455 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 DESP17661 470 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 KITLGP21583 273 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 CCNG1P51959 295 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 YWHAGP61981 247 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 IMMTQ16891 758 aaKnown RBP1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 THEM4Q5T1C6 240 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 AP1ARQ63HQ0 302 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 ANKRD26P1Q6NSI1 321 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 CDKL3Q8IVW4 592 aaPredicted RBP1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 C17orf50Q8WW18 174 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 MRGPRFQ96AM1 343 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 SLC41A3Q96GZ6 507 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 CNDP1Q96KN2 507 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 NT5MQ9NPB1 228 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF230Q9UIE0 474 aaPredicted RBP1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 TRIP11Q15643 1979 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 THADAQ6YHU6 1953 aa1.94□□□□□ -2.1
RNU4-28P-201ENST00000364739 IGHV1OR15-9A0A0B4J2B8 117 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 DYNC1I1O14576 645 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 CCNB1P14635 433 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 GDI2P50395 445 aaKnown RBP1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 UBE2NP61088 152 aaKnown RBP1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 SLC25A11Q02978 314 aaKnown RBP1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 SRSF5Q13243 272 aaKnown RBP1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 MS4A15Q8N5U1 240 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 ST20-AS1Q8NBB2 130 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR9A2Q8NGT5 310 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 PLPPR1Q8TBJ4 325 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 PTX4Q96A99 478 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 TBL1YQ9BQ87 522 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 ROPN1BQ9BZX4 212 aaPredicted RBP1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 NPTNQ9Y639 398 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms