RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 A0A1B0GX12 115 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 IMPA2O14732 288 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TO15178 435 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 XRCC3O43542 346 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 NSA2O95478 260 aaKnown RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ACY1Q03154 408 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 CDONQ4KMG0 1287 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 SEZ6L2Q6UXD5 910 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ACOT7LQ6ZUV0 252 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 OR2L13Q8N349 312 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 TCTEX1D2Q8WW35 142 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 FKRPQ9H9S5 495 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 WNK3Q9BYP7 1800 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 BHLHE40O14503 412 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 IGF2P01344 180 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ZP3P21754 424 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 HNF4GQ14541 408 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 LYRM4Q9HD34 91 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 ACAD8Q9UKU7 415 aa12.64□□□□□ -0.39
COL6A1-201ENST00000361866 MRPS28Q9Y2Q9 187 aaKnown RBP12.64□□□□□ -0.39
COL6A1-201ENST00000361866 LTBP1Q14766 1721 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 CDKN2AP42771 156 aaKnown RBP12.63□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF674Q2M3X9 581 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 RNLSQ5VYX0 342 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 LILRA6Q6PI73 481 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 TRILQ7L0X0 811 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 OR10AC1Q8NH08 325 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 CMBLQ96DG6 245 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 PBDC1Q9BVG4 233 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 PRSS44E7EML9 344 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 HRH1P35367 487 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 BIDP55957 195 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 PLA2G7Q13093 441 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 TCEAL6Q6IPX3 200 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 GPR119Q8TDV5 335 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 SCML1Q9UN30 329 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 LILRB3O75022 631 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 LCATP04180 440 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 GNB3P16520 340 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 ALOX5APP20292 161 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 GLIPR1L1Q6UWM5 242 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 CLRN3Q8NCR9 226 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 FAM71CQ8NEG0 241 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 LPAR4Q99677 370 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 MED29Q9NX70 200 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 PCNTO95613 3336 aa12.63□□□□□ -0.39
COL6A1-201ENST00000361866 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 C7orf66A4D0T2 115 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 LINC00862A6NCI5 91 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 GLSO94925 669 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-201ENST00000361866 CXCL10P02778 98 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 DAP3P51398 398 aaKnown RBP12.62□□□□□ -0.39
COL6A1-201ENST00000361866 DOC2BQ14184 412 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 SLC25A30Q5SVS4 291 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 LCORQ96JN0 433 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-201ENST00000361866 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 OR6C65A6NJZ3 312 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 GALP22466 123 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 CPT2P23786 658 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 PSMB6P28072 239 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 PDSS1Q5T2R2 415 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 NKAIN2Q5VXU1 208 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 FCRL6Q6DN72 434 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 FAM219AQ8IW50 185 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 BATF2Q8N1L9 274 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 LRRC18Q8N456 261 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 KTI12Q96EK9 354 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-201ENST00000361866 TEX101Q9BY14 249 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 TCEAL2Q9H3H9 227 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-201ENST00000361866 A6NIZ1 184 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 GREM1O60565 184 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 OR2F2O95006 317 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 FOSL1P15407 271 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 MGMTP16455 207 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 RAG2P55895 527 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 OR2B8PP59922 312 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 RAP1BP61224 184 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 RAP1AP62834 184 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 FUT5Q11128 374 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 OR2F1Q13607 317 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 BEND4Q6ZU67 534 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 CA13Q8N1Q1 262 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 ARIH2OSQ8N7S6 290 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 C1orf198Q9H425 327 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 MTFP1Q9UDX5 166 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 GMEB2Q9UKD1 530 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 LCTP09848 1927 aa12.62□□□□□ -0.39
COL6A1-201ENST00000361866 RBBP6Q7Z6E9 1792 aaKnown RBP12.62□□□□□ -0.39
COL6A1-201ENST00000361866 A0A1W2PPV9 198 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 DNAJB6O75190 326 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 ZGLP1P0C6A0 271 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms