RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LDOC1O95751 146 aaPredicted RBP20.25■□□□□ 0.83
LDB1-201ENST00000361198 CER1O95813 267 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 FBXO45P0C2W1 286 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 IFNGR1P15260 489 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 KIR3DL2P43630 455 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 VEGFCP49767 419 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 BLVRAP53004 296 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 ZP4Q12836 540 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 MFSD13AQ14CX5 517 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 WDR38Q5JTN6 314 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 LRRTM1Q86UE6 522 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 DND1Q8IYX4 353 aaKnown RBP20.25■□□□□ 0.83
LDB1-201ENST00000361198 ELMOD2Q8IZ81 293 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 SLC22A8Q8TCC7 542 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 UTP23Q9BRU9 249 aaKnown RBP20.25■□□□□ 0.83
LDB1-201ENST00000361198 COMMD4Q9H0A8 199 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 COA3Q9Y2R0 106 aaPredicted RBP20.25■□□□□ 0.83
LDB1-201ENST00000361198 MPZL1O95297 269 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 SELENOPP49908 381 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 ZNF41P51814 821 aaPredicted RBP20.25■□□□□ 0.83
LDB1-201ENST00000361198 ART1P52961 327 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 SLC17A1Q14916 467 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 PCOLCEQ15113 449 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 SLC18B1Q6NT16 456 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 Q6ZTK2 550 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 NLRC3Q7RTR2 1065 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 CCDC28AQ8IWP9 274 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 ZNF679Q8IYX0 411 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 AGBL5Q8NDL9 886 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 OR2T35Q8NGX2 323 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 ELP5Q8TE02 316 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 ASB10Q8WXI3 467 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 C4orf45Q96LM5 186 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 WDR54Q9H977 334 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 MED12Q93074 2177 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 HSPB2A8KAH6 182 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 ZNF254O75437 659 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 CDK2P24941 298 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 MSX1P28360 303 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 CRABP1P29762 137 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 SCAND1P57086 179 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 ARPC4P59998 168 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 TLE3Q04726 772 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 GLO1Q04760 184 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 FMODQ06828 376 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 HSPB2Q16082 182 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 PLPPR5Q32ZL2 321 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 FAM209AQ5JX71 171 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 POC1BQ8TC44 478 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 ASB17Q8WXJ9 295 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 METTL17Q9H7H0 456 aaPredicted RBP20.24■□□□□ 0.83
LDB1-201ENST00000361198 MED29Q9NX70 200 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 EML6Q6ZMW3 1958 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 ACOT7O00154 380 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 DKK1O94907 266 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 MPC2O95563 127 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 CRYZL1O95825 349 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 CELA2AP08217 269 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 ZNF81P51508 661 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 MECP2P51608 486 aaKnown RBP20.24■□□□□ 0.83
LDB1-201ENST00000361198 RPS15P62841 145 aaKnown RBP20.24■□□□□ 0.83
LDB1-201ENST00000361198 POU3F1Q03052 451 aaPredicted RBP20.24■□□□□ 0.83
LDB1-201ENST00000361198 ZFP36L1Q07352 338 aaKnown RBP20.24■□□□□ 0.83
LDB1-201ENST00000361198 RASGEF1BQ0VAM2 473 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 OR8H3Q8N146 312 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 TMEM106AQ96A25 262 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 SPACA9Q96E40 222 aaPredicted RBP20.24■□□□□ 0.83
LDB1-201ENST00000361198 OR10A4Q9H209 315 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 CHST11Q9NPF2 352 aa20.24■□□□□ 0.83
LDB1-201ENST00000361198 IGLV3-32A0A0A0MS00 114 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 TEX51A0A1B0GUA7 166 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 LIPT2A6NK58 231 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 NPIPA5E9PKD4 350 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 KHDRBS3O75525 346 aaKnown RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 WNT11O96014 354 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 DUSP3P51452 185 aaPredicted RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 AP2S1P53680 142 aaPredicted RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 SIGLEC14Q08ET2 396 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 RIPPLY1Q0D2K3 151 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 SNTA1Q13424 505 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 DNAAF1Q8NEP3 725 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 GPR148Q8TDV2 347 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 MR1Q95460 341 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 MRGPRX4Q96LA9 322 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 ABHD6Q9BV23 337 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 EIF3KQ9UBQ5 218 aaKnown RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 GPN3Q9UHW5 284 aaPredicted RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 FBXL2Q9UKC9 423 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 NPIPA1Q9UND3 350 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 B3GALT1Q9Y5Z6 326 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 TRAV8-7A0A075B6U6 113 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 TRBV5-7A0A0A0MS05 114 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 ZNF432O94892 652 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 PNPP00491 289 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 KLK3P07288 261 aaPredicted RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 UMODP07911 640 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 CYC1P08574 325 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 CPN1P15169 458 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 SLC25A53Q5H9E4 307 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 GLDNQ6ZMI3 551 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms