RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PIGFQ07326 219 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 CLEC18BQ6UXF7 455 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 CLEC18CQ8NCF0 446 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 ASH2LQ9UBL3 628 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 KCNG2Q9UJ96 466 aa22.18■■□□□ 1.14
SSBP3-202ENST00000357475 OR5H1A6NKK0 313 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 C19orf84I3L1E1 186 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 SLC1A7O00341 560 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 SBK2P0C263 348 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 ZNF823P16415 610 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 SLC15A1P46059 708 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 CAPZA2P47755 286 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 ENTPD1P49961 510 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 BLVRAP53004 296 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 NRN1LQ496H8 165 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 OR7E24Q6IFN5 339 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 SLC16A14Q7RTX9 510 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 DPY19L4Q7Z388 723 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 OR10H5Q8NGA6 315 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 BOD1Q96IK1 185 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 AMELYQ99218 206 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 CNN2Q99439 309 aaKnown RBP22.17■■□□□ 1.14
SSBP3-202ENST00000357475 HDHD5Q9BXW7 423 aa22.17■■□□□ 1.14
SSBP3-202ENST00000357475 FAM20BO75063 409 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 CST2P09228 141 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 LSM6P62312 80 aaKnown RBP22.16■■□□□ 1.14
SSBP3-202ENST00000357475 MVKQ03426 396 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 SLC18B1Q6NT16 456 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 ZNF786Q8N393 782 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 GGHQ92820 318 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 PAK1IP1Q9NWT1 392 aaPredicted RBP22.16■■□□□ 1.14
SSBP3-202ENST00000357475 CYB5R1Q9UHQ9 305 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 COPS3Q9UNS2 423 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 MYRFQ9Y2G1 1151 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 RPL36Q9Y3U8 105 aaKnown RBP22.16■■□□□ 1.14
SSBP3-202ENST00000357475 FARS2O95363 451 aaKnown RBP22.16■■□□□ 1.14
SSBP3-202ENST00000357475 MMP7P09237 267 aaPredicted RBP22.16■■□□□ 1.14
SSBP3-202ENST00000357475 CD79AP11912 226 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 ZNF32P17041 273 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 TAB1Q15750 504 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 PCK2Q16822 640 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 CFAP77Q6ZQR2 320 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 SLC16A9Q7RTY1 509 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 STEAP2Q8NFT2 490 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 MAP6Q96JE9 813 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 TBX5Q99593 518 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 C1QTNF6Q9BXI9 259 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 TTTY10Q9BZA0 68 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 B3GNT2Q9NY97 397 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 PSORS1C1Q9UIG5 152 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 POLR1DQ9Y2S0 133 aa22.16■■□□□ 1.14
SSBP3-202ENST00000357475 J3QRE1 110 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 RER1O15258 196 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 TMED1Q13445 227 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 ALKBH2Q6NS38 261 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 MDP1Q86V88 176 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 CDC20BQ86Y33 519 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 OR52I1Q8NGK6 324 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 SSC4DQ8WTU2 575 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 PLCXD1Q9NUJ7 323 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 MRPS18AQ9NVS2 196 aaKnown RBP22.15■■□□□ 1.14
SSBP3-202ENST00000357475 EXOGQ9Y2C4 368 aaKnown RBP22.15■■□□□ 1.14
SSBP3-202ENST00000357475 SLC25A15Q9Y619 301 aa22.15■■□□□ 1.14
SSBP3-202ENST00000357475 HELZ2Q9BYK8 2649 aaKnown RBP22.14■■□□□ 1.13
SSBP3-202ENST00000357475 SNTNA6NMZ2 147 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 PRR32B1ATL7 298 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 THBDP07204 575 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 ATP6V1E1P36543 226 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 UBE2NP61088 152 aaKnown RBP22.14■■□□□ 1.13
SSBP3-202ENST00000357475 TEX30Q5JUR7 227 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 TIMM23BQ5SRD1 257 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 TMEM154Q6P9G4 183 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 SLC35F2Q8IXU6 374 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 C17orf78Q8N4C9 275 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 AKR7LQ8NHP1 331 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 WFIKKN1Q96NZ8 548 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 CDADC1Q9BWV3 514 aa22.14■■□□□ 1.13
SSBP3-202ENST00000357475 GDF2Q9UK05 429 aaPredicted RBP22.14■■□□□ 1.13
SSBP3-202ENST00000357475 ARPC4-TTLL3A0A0A6YYG9 625 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 C12orf71A8MTZ7 269 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 PSG4Q00888 419 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 AQP6Q13520 282 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 SEZ6L2Q6UXD5 910 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 AHSA2Q719I0 299 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 SSX6Q7RTT6 188 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 DCXRQ7Z4W1 244 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 MYPOPQ86VE0 399 aaPredicted RBP22.13■■□□□ 1.13
SSBP3-202ENST00000357475 OR10S1Q8NGN2 331 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 LINC01560Q8TB33 94 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 ST7LQ8TDW4 575 aa22.13■■□□□ 1.13
SSBP3-202ENST00000357475 ZC3HAV1LQ96H79 300 aaKnown RBP22.13■■□□□ 1.13
SSBP3-202ENST00000357475 UTP20O75691 2785 aaKnown RBP22.13■■□□□ 1.13
SSBP3-202ENST00000357475 CELA3BP08861 270 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 CRHBPP24387 322 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 CXCR4P61073 352 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 RAB1AP62820 205 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 EIF2B1Q14232 305 aaKnown RBP22.12■■□□□ 1.13
SSBP3-202ENST00000357475 CCDC92Q53HC0 331 aaPredicted RBP22.12■■□□□ 1.13
SSBP3-202ENST00000357475 SPATC1Q76KD6 591 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 OR10H4Q8NGA5 316 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms