RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ZAR1Q86SH2 424 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 PDZD9Q8IXQ8 264 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 PRR22Q8IZ63 422 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 C7orf57Q8NEG2 295 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 CT55Q8WUE5 264 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 DAZLQ92904 295 aaKnown RBP11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 VSTM2LQ96N03 204 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 NMNAT2Q9BZQ4 307 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC26A1Q9H2B4 701 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 CCDC86Q9H6F5 360 aaKnown RBP11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 IFT46Q9NQC8 304 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 DLL3Q9NYJ7 618 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 MED11Q9P086 117 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 SPTBN4Q9H254 2564 aa11.42□□□□□ -0.58
RTFDC1-202ENST00000357348 LGALS8O00214 317 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 BRINP1O60477 761 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 GLSO94925 669 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ART1P52961 327 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 RPS15P62841 145 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 LGALS3BPQ08380 585 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ZNHIT3Q15649 155 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 PAPD4Q6PIY7 484 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 MED25Q71SY5 747 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 DND1Q8IYX4 353 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 SDR9C7Q8NEX9 313 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 OR2AK2Q8NG84 335 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 MRPS24Q96EL2 167 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ZPBPQ9BS86 351 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 TTTY10Q9BZA0 68 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 DNTTIP1Q9H147 329 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 OR10H1Q9Y4A9 318 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 KLF2Q9Y5W3 355 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 MRPS18BQ9Y676 258 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 FRYQ5TBA9 3013 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 A0A1B0GWA3 101 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 UBE2QL1A1L167 161 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ACOD1A6NK06 481 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 MPTX1A8MV57 137 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 H7C417 338 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 DNASE2O00115 360 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ABCD4O14678 606 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ARPC5O15511 151 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 NDUFB2O95178 105 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ONECUT2O95948 504 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 GUSBP08236 651 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 CT45A8P0DMV1 189 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 CT45A9P0DMV2 189 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 RPA2P15927 270 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 MPGP29372 298 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 OTX2P32243 289 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 PSMB10P40306 273 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 NANOS3P60323 173 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 RBMS2Q15434 407 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 TGIF1Q15583 401 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 C2orf68Q2NKX9 166 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 CT45A2Q5DJT8 189 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 OR7E24Q6IFN5 339 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 LRFN4Q6PJG9 635 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 CPEB2Q7Z5Q1 589 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 TMPRSS12Q86WS5 348 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 SERPINA12Q8IW75 414 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 C9orf40Q8IXQ3 194 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ZNF614Q8N883 585 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 ZNRF4Q8WWF5 429 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 HOXB13Q92826 284 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC25A18Q9H1K4 315 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC25A32Q9H2D1 315 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 COPS7AQ9UBW8 275 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 MTFP1Q9UDX5 166 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 GPR160Q9UJ42 338 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 HRH3Q9Y5N1 445 aa11.41□□□□□ -0.58
RTFDC1-202ENST00000357348 IGKV1D-16P01601 117 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 IGKV3-11P04433 115 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 CELA2AP08217 269 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 CFPP27918 469 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 NAA10P41227 235 aaPredicted RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 FOLR3P41439 243 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ACAA2P42765 397 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 BIKQ13323 160 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 PON3Q15166 354 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ETFDHQ16134 617 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC6A19Q695T7 634 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 FAAP20Q6NZ36 180 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 STAC2Q6ZMT1 411 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 LRRTM1Q86UE6 522 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 NPEPL1Q8NDH3 523 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 OR52B4Q8NGK2 314 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 OR5M1Q8NGP8 315 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 OR1N1Q8NGS0 311 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 OR4K13Q8NH42 304 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 LPAR4Q99677 370 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 WDR77Q9BQA1 342 aaPredicted RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 SPRY4Q9C004 299 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ARL6Q9H0F7 186 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 NXF5Q9H1B4 397 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC6A15Q9H2J7 730 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 WDR54Q9H977 334 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms