RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SLC22A24Q8N4F4 322 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 C19orf47Q8N9M1 422 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 FER1L6-AS2Q96M78 137 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 NDFIP1Q9BT67 221 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 EGLN1Q9GZT9 426 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 IL17CQ9P0M4 197 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OR10AD1Q8NGE0 317 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OR52I1Q8NGK6 324 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 NUP98P52948 1817 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 H0YIV9 168 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 SRMP19623 302 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 EVX1P49640 407 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 MEOX2P50222 304 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 SUMO1P63165 101 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OR13C8Q8NGS7 320 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OR13C9Q8NGT0 318 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 DTD2Q96FN9 168 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 PIGQQ9BRB3 760 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 C16orf70Q9BSU1 422 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 ATP23Q9Y6H3 246 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 G0S2P27469 103 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 LGI3Q8N145 548 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 FAM26EQ8N5C1 309 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OR51A4Q8NGJ6 313 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OR51A2Q8NGJ7 313 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 LRRC15Q8TF66 581 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 TMEM106AQ96A25 262 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 FGGYQ96C11 551 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 SLC22A12Q96S37 553 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 M0QYG6 137 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 M0QZK8 103 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 SMAD6O43541 496 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 ZNF620Q6ZNG0 422 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 BAP18Q8IXM2 172 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 ZNF485Q8NCK3 441 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 PIGTQ969N2 578 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 UBQLN3Q9H347 655 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 UTS2O95399 124 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 PSMB6P28072 239 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 NPY4RP50391 375 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 ZNF140P52738 457 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 SELENBP1Q13228 472 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 FIZ1Q96SL8 496 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 S1PR3Q99500 378 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 WDR76Q9H967 626 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 A0A0A6YYJ9 748 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 ELAVL4P26378 380 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 ZNF93P35789 620 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 GP2P55259 537 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 RACK1P63244 317 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SLC5A12Q1EHB4 618 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 OR2M7Q8NG81 312 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 OR4D10Q8NGI6 311 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 AKR7LQ8NHP1 331 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 ALG12Q9BV10 488 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 CCR6P51684 374 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SEMA3BQ13214 749 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 TP53INP2Q8IXH6 220 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 CISD2Q8N5K1 135 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 OR10G3Q8NGC4 313 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 OR5M11Q96RB7 305 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 A4GALTQ9NPC4 353 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 HIST1H1TP22492 207 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 RTL8BQ17RB0 113 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 MZB1Q8WU39 189 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SSSCA1O60232 199 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 TCN2P20062 427 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 MFAP5Q13361 173 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SIGLECL1Q8N7X8 197 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 DUSP22Q9NRW4 184 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 ST8SIA3O43173 380 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 AIFM1O95831 613 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 PIGAP37287 484 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 VAMP3Q15836 100 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 DPPA4Q7L190 304 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 PLPP7Q8NBV4 271 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 ZNF768Q9H5H4 540 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 CRXO43186 299 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 GJB3O75712 270 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 ACKR3P25106 362 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SOX18P35713 384 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 CPEB3Q8NE35 698 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 OR6S1Q8NH40 331 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 CABLES2Q9BTV7 478 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 SRRQ9GZT4 340 aa10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 RP1L1Q8IWN7 2480 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-202ENST00000356805 RGPD1P0DJD0 1748 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms