RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 LANCL2Q9NS86 450 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 NDUFB11Q9NX14 153 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 YTHDF2Q9Y5A9 579 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 TRABD2BA6NFA1 517 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 SELENOFO60613 162 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 JTBO76095 146 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OR2F2O95006 317 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 S100A8P05109 93 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 GPX2P18283 190 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 TBXA2RP21731 343 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 TGM1P22735 817 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 ABCD3P28288 659 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 TRIM23P36406 574 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 UBE2IP63279 158 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 OR2F1Q13607 317 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 NKAIN1Q4KMZ8 207 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 PXDC1Q5TGL8 231 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 ZNF705AQ6ZN79 300 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 TMUB2Q71RG4 321 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 FAM185AQ8N0U4 392 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 APH1BQ8WW43 257 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 SEC22AQ96IW7 307 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OPALINQ96PE5 141 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 ACTR3CQ9C0K3 210 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 GAR1Q9NY12 217 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 TAS2R5Q9NYW4 299 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 MMP17Q9ULZ9 603 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 M0QYG6 137 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 PPP6CO00743 305 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 TERTO14746 1132 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 ARPC3O15145 178 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CD1EP15812 388 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 TMEM11P17152 192 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 JUNBP17275 347 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 SDHAP31040 664 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 MRPL19P49406 292 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 ERVFC1P60507 584 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 GNB1P62873 340 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 PHLDA2Q53GA4 152 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 SYT6Q5T7P8 510 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 C19orf35Q6ZS72 473 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 NRARPQ7Z6K4 114 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OR52H1Q8NGJ2 320 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 RASD2Q96D21 266 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 QRSL1Q9H0R6 528 aaKnown RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 GABARAPL1Q9H0R8 117 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 UBQLN3Q9H347 655 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 MED9Q9NWA0 146 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 G3V3Y1 287 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 SMLR1H3BR10 107 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 DSCR3O14972 297 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 FABP7O15540 132 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CYTIPO60759 359 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 AKR7A3O95154 331 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 LGI1O95970 557 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CRYAAP02489 173 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 H2AFB1P0C5Y9 115 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CD22P20273 847 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 NPY4RP50391 375 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 TPMTP51580 245 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OR8G2PQ6IF36 304 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CGB2Q6NT52 195 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CMTM4Q8IZR5 234 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 NANOGP1Q8N7R0 232 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 SLC38A9Q8NBW4 561 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 SAT2Q96F10 170 aaPredicted RBP5.92□□□□□ -1.46
UPF2-201ENST00000356352 MS4A4AQ96JQ5 239 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 OXGR1Q96P68 337 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CTRCQ99895 268 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 S1PR5Q9H228 398 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 CHST8Q9H2A9 424 aa5.92□□□□□ -1.46
UPF2-201ENST00000356352 LINC01387J3KSC0 135 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 HS3ST1O14792 307 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SULT1C4O75897 302 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 NPPBP16860 134 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GLRA1P23415 457 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SUMO3P55854 103 aaPredicted RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 PPIAP62937 165 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 BTN1A1Q13410 526 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SHHQ15465 462 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SMN1Q16637 294 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 CTU2Q2VPK5 515 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 THNSL2Q86YJ6 484 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 UBALD2Q8IYN6 164 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 BCORP1Q8N888 145 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PLPP7Q8NBV4 271 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 BPIFCQ8NFQ6 507 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SLAMF6Q96DU3 332 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 MRPS24Q96EL2 167 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 PHF7Q9BWX1 381 aaPredicted RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 MARCH5Q9NX47 278 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 LOC107986453A0A1B0GWG9 222 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZFP92A6NM28 416 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 AQP7O14520 342 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 TAPBPO15533 448 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 CPEP16870 476 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GCAP28676 217 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 DDOSTP39656 456 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 NDUFA6P56556 154 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms