RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 LILRA2Q8N149 483 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 OR1L4Q8NGR5 311 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 C12orf42Q96LP6 360 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 CD1BP29016 333 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 WDR5P61964 334 aaKnown RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 RPE65Q16518 533 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 RASD2Q96D21 266 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 NUP98P52948 1817 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 RGPD1P0DJD0 1748 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 IRS1P35568 1242 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF816Q0VGE8 651 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ACTBL2Q562R1 376 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ASTLQ6HA08 431 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 SLC46A2Q9BY10 475 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 PCDHGA9Q9Y5G4 932 aaKnown RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 BMI1P35226 326 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 PSMB2P49721 201 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF266Q14584 549 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 TBCEQ15813 527 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 PIWIL3Q7Z3Z3 882 aaKnown RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 CXorf67Q86X51 503 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 TNFRSF13CQ96RJ3 184 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 AP5S1Q9NUS5 200 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 PROCRQ9UNN8 238 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 C14orf79Q96F83 325 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 MSL2Q9HCI7 577 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CGGBP1Q9UFW8 167 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 TRAPPC4Q9Y296 219 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 A0A1B0GTW7 788 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CRYAAP02489 173 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 GLAP06280 429 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CD300LGQ6UXG3 332 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 HSD17B13Q7Z5P4 300 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 ADIPOR1Q96A54 375 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 RTP4Q96DX8 246 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 RGPD2P0DJD1 1756 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 PXDC1Q5TGL8 231 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 KDM4DQ6B0I6 523 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 UMODL1-AS1Q8N2C9 162 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 TCEAL7Q9BRU2 100 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 COL14A1Q05707 1796 aaKnown RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 H7BYZ3 331 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 SIX6O95475 246 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 DGAT2L7PQ6IED9 249 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 TRNP1Q6NT89 227 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 ACSM6Q6P461 480 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 ROBO4Q8WZ75 1007 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CPPED1Q9BRF8 314 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CENPOQ9BU64 300 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 TAF9BQ9HBM6 251 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 EMC7Q9NPA0 242 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 RAB40ALP0C0E4 278 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM179BQ7Z7N9 219 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 ZFP62Q8NB50 900 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 RAB40AQ8WXH6 277 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 RTL8AQ9BWD3 113 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 EIF1BO60739 113 aaKnown RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CD40P25942 277 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 DTWD1Q8N5C7 304 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 GAR1Q9NY12 217 aaKnown RBP15.86■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM181Q9P2C4 612 aa15.86■□□□□ 0.13
COL27A1-201ENST00000356083 CCR7P32248 378 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 NFATC3Q12968 1075 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 STUMQ69YW2 141 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 C17orf78Q8N4C9 275 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 LGALS14Q8TCE9 139 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 TRBV4-1A0A0J9YWV2 114 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 FDXRP22570 491 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF90Q03938 601 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 OR2AK2Q8NG84 335 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 FBXO8Q9NRD0 319 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 SLC22A11Q9NSA0 550 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 DCAF7P61962 342 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 PGGHGQ32M88 737 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 HENMT1Q5T8I9 393 aaKnown RBP15.85■□□□□ 0.13
COL27A1-201ENST00000356083 OR51F2Q8NH61 342 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 OR5K2Q8NHB8 316 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 C8orf44Q96CB5 159 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 C1GALT1Q9NS00 363 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 APEX1P27695 318 aaKnown RBP15.85■□□□□ 0.13
COL27A1-201ENST00000356083 NAXDQ8IW45 347 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 LYSMD1Q96S90 227 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 FZD9O00144 591 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 NME4O00746 187 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 PMP22Q01453 160 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 DOK3Q7L591 496 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF764Q96H86 408 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-201ENST00000356083 GPR78Q96P69 363 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 FAM189A1O60320 539 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 CTSCP53634 463 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 SEMA6DQ8NFY4 1073 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 YIPF5Q969M3 257 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 PSD2Q9BQI7 771 aa15.85■□□□□ 0.13
COL27A1-201ENST00000356083 DCTN6O00399 190 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 PRAF2O60831 178 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms