RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 TIMD4Q96H15 378 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 C10orf90Q96M02 699 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 SIAEQ9HAT2 523 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 LANCL2Q9NS86 450 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 UFSP2Q9NUQ7 469 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 MRPS2Q9Y399 296 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 TERTO14746 1132 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 ADRB1P08588 477 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 MRPL19P49406 292 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 ERVFC1P60507 584 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 MAML2Q8IZL2 1156 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 CPEB3Q8NE35 698 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 M1APQ8TC57 530 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 SLCO1B1Q9Y6L6 691 aa13.65□□□□□ -0.22
LMX1B-201ENST00000355497 XRN1Q8IZH2 1706 aaKnown RBP13.65□□□□□ -0.22
LMX1B-201ENST00000355497 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.23
LMX1B-201ENST00000355497 EIF4E2O60573 245 aaKnown RBP13.65□□□□□ -0.23
LMX1B-201ENST00000355497 JTBO76095 146 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 TRAPPC2P0DI81 140 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 TRAPPC2BP0DI82 140 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 TCN2P20062 427 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 NTF3P20783 257 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 HAGHQ16775 308 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 LRRC26Q2I0M4 334 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 GRINAQ7Z429 371 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 NHLRC2Q8NBF2 726 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 CSF3RQ99062 836 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 CDCP1Q9H5V8 836 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 KIAA1456Q9P272 454 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 A3GALT2U3KPV4 340 aa13.65□□□□□ -0.23
LMX1B-201ENST00000355497 AKR7A3O95154 331 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 TEAD1P28347 426 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 RPS19P39019 145 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 BAK1Q16611 211 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 KHDC1LQ5JSQ8 128 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 FAM162BQ5T6X4 162 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 PGBD5Q8N414 524 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 TSLPQ969D9 159 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ZNF2Q9BSG1 426 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 OR51I2Q9H344 312 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 HS3ST2Q9Y278 367 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 YKT6O15498 198 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 C1QBP02746 253 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 EDN1P05305 212 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 APOBEC1P41238 236 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 OR10A3P58181 314 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 OR5AS1Q8N127 324 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ZADH2Q8N4Q0 377 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 BHLHE23Q8NDY6 225 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 NDFIP1Q9BT67 221 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 SLC25A32Q9H2D1 315 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ACOXLQ9NUZ1 547 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 PPP1R3CQ9UQK1 317 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 TLCD2A6NGC4 264 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ALOX12BO75342 701 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 RBP2P50120 134 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 RPS23P62266 143 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ACTR3CQ9C0K3 210 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 BARX1Q9HBU1 254 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 DCTN6O00399 190 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 PIPP12273 146 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ALOX5APP20292 161 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 CSNK1EP49674 416 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 CCL11P51671 97 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 LIM2P55344 173 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 FAM71E1Q6IPT2 247 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 SLC25A43Q8WUT9 341 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 DDOQ99489 341 aa13.64□□□□□ -0.23
LMX1B-201ENST00000355497 NDRG4Q9ULP0 352 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
LMX1B-201ENST00000355497 ARPC3O15145 178 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 MMP11P24347 488 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 CYB561P49447 251 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 RTL8BQ17RB0 113 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 ACOT6Q3I5F7 207 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-201ENST00000355497 CDC20BQ86Y33 519 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 SLC22A12Q96S37 553 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 MBOAT4Q96T53 435 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 SYT11Q9BT88 431 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 FITM1A5D6W6 292 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 TGOLN2O43493 480 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 POU3F3P20264 500 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-201ENST00000355497 MLF1P58340 268 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 C17orf99Q6UX52 265 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 Q6ZNX1 250 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 ZNF596Q8TC21 504 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 ZC3HAV1LQ96H79 300 aaKnown RBP13.63□□□□□ -0.23
LMX1B-201ENST00000355497 LYSMD1Q96S90 227 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 FBXO8Q9NRD0 319 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 XKRY2A2RUG3 117 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 TAPBPO15533 448 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 PIGAP37287 484 aa13.63□□□□□ -0.23
LMX1B-201ENST00000355497 ABHD17CQ6PCB6 329 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms