RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 KIR2DS1Q14954 304 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CDONQ4KMG0 1287 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 TMEM81Q6P7N7 255 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 H2BFWTQ7Z2G1 175 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 SLAMF6Q96DU3 332 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 KCNIP2Q9NS61 270 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 TAS2R4Q9NYW5 299 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 TBX21Q9UL17 535 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 SLC5A6Q9Y289 635 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 A0A096LPE4 126 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 LOC107986453A0A1B0GWG9 222 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 A0A1W2PPZ6 126 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 FIGNL2A6NMB9 653 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 TCRBP04435 133 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 TESK1Q15569 626 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ACKR1Q16570 336 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 KDM4DQ6B0I6 523 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 GCNT2Q8N0V5 402 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 PRSS35Q8N3Z0 413 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 DEFB108BQ8NET1 73 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 LINC01599Q8WXQ3 324 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 MKRN2OSH3BPM6 223 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ACOT8O14734 319 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 OR2J2O76002 312 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ARR3P36575 388 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 HNRNPFP52597 415 aaKnown RBP16.47■□□□□ 0.23
COL18A1-202ENST00000355480 GNB1P62873 340 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ZNF266Q14584 549 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 LIPNQ5VXI9 398 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 GINS3Q9BRX5 216 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 TMEM43Q9BTV4 400 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 FAM117AQ9C073 453 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 RIMS4Q9H426 269 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ZC3H12DA2A288 527 aaKnown RBP16.47■□□□□ 0.23
COL18A1-202ENST00000355480 C5orf49A4QMS7 147 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CRYM-AS1A6NIL9 109 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CHRM2P08172 466 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 OR10J4P0C629 311 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 GLULP15104 373 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 PIGAP37287 484 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CCR6P51684 374 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 CORO6Q6QEF8 472 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 OR51F2Q8NH61 342 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 PDFQ9HBH1 243 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 ZNF346Q9UL40 294 aaKnown RBP16.47■□□□□ 0.23
COL18A1-202ENST00000355480 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
COL18A1-202ENST00000355480 OPCMLQ14982 345 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 SVBPQ8N300 66 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 TAS2R5Q9NYW4 299 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 OR8G2PQ6IF36 304 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 POLDIP2Q9Y2S7 368 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 LGALS8O00214 317 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 CXCL13O43927 109 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 GLAP06280 429 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 GFERP55789 205 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 CISD2Q8N5K1 135 aaKnown RBP16.46■□□□□ 0.23
COL18A1-202ENST00000355480 FGF14Q92915 247 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 SLCO1B1Q9Y6L6 691 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 MGST1P10620 155 aaKnown RBP16.46■□□□□ 0.23
COL18A1-202ENST00000355480 SDHAP31040 664 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 GNB2P62879 340 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 CAMKMTQ7Z624 323 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 HSD17B11Q8NBQ5 300 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 ISYNA1Q9NPH2 558 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 NDRG3Q9UGV2 375 aa16.46■□□□□ 0.23
COL18A1-202ENST00000355480 PIPP12273 146 aaPredicted RBP16.46■□□□□ 0.22
COL18A1-202ENST00000355480 RFC3P40938 356 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 RNF4P78317 190 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 CLN3Q13286 438 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 ANKRD16Q6P6B7 361 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 OR10K1Q8NGX5 313 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 C16orf52Q8NHV5 167 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 OR52A5Q9H2C5 316 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 SPACA1Q9HBV2 294 aa16.46■□□□□ 0.22
COL18A1-202ENST00000355480 FITM1A5D6W6 292 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SBK2P0C263 348 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 THEM4Q5T1C6 240 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 ADGRF3Q8IZF5 1079 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SLC7A5P1Q8MH63 180 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 EXD3Q8N9H8 876 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SLC30A7Q8NEW0 376 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 OR13F1Q8NGS4 319 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 CALCBP10092 127 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 HIST1H1CP16403 213 aaKnown RBP16.45■□□□□ 0.22
COL18A1-202ENST00000355480 HCCSP53701 268 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 TMEM196Q5HYL7 178 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 C9orf50Q5SZB4 431 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 DLEU7Q6UYE1 221 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 KCNE4Q8WWG9 221 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF75AQ96N20 296 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 C20orf85Q9H1P6 137 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SMCO4Q9NRQ5 59 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 PTTG3PQ9NZH4 202 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 ZGLP1P0C6A0 271 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 ZDHHC11BP0C7U3 371 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SLC6A12P48065 614 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SUB1P53999 127 aaKnown RBP eCLIP16.45■□□□□ 0.224e-6■■□□□ 11.9
COL18A1-202ENST00000355480 CLDN15P56746 228 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 DUSP8Q13202 625 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms