RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 FXYD4P59646 89 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 RSU1Q15404 277 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 MPEG1Q2M385 716 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 SLC22A6Q4U2R8 563 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 STPG1Q5TH74 334 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 LINC00346Q8IVM7 164 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 OR52B4Q8NGK2 314 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 C20orf141Q9NUB4 165 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 QPCTLQ9NXS2 382 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 VSX1Q9NZR4 365 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ITGB2P05107 769 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 VWA2Q5GFL6 755 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF547Q8IVP9 402 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 NDRG3Q9UGV2 375 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 P2RY10O00398 339 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 HYAL3O43820 417 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 PMS2P2O95744 297 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 CD82P27701 267 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 PPIAP62937 165 aaKnown RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF169Q14929 603 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 GPNMBQ14956 572 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ARPC5LQ9BPX5 153 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ENY2Q9NPA8 101 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 RPS10P5Q9NQ39 176 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 DNAJB11Q9UBS4 358 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF223Q9UK11 482 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 A0A1B0GUH1 482 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 WNT1P04628 370 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 HOXB5P09067 269 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ATF1P18846 271 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ST3GAL2Q16842 350 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 LCN10Q6JVE6 187 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 DND1Q8IYX4 353 aaKnown RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 SVBPQ8N300 66 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 LINC01555Q8NAE3 123 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 OR4K15Q8NH41 348 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 SMIM4Q8WVI0 70 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 TRMT61AQ96FX7 289 aaKnown RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 RNF170Q96K19 258 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF285Q96NJ3 590 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ACKR4Q9NPB9 350 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 PLEK2Q9NYT0 353 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 IGHV3-20A0A0C4DH32 117 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 CCDC163A0A0D9SF12 145 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 F5H5K5 113 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 PLA2G10O15496 165 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 MYF5P13349 255 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 IFNGR1P15260 489 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF16P17020 682 aaPredicted RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 BCKDHBP21953 392 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 RPS27P42677 84 aaKnown RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 CLDN6P56747 220 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 CMIPQ8IY22 773 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ZBTB44Q8NCP5 570 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ANGPTL6Q8NI99 470 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 ST8SIA4Q92187 359 aa11.21□□□□□ -0.61
COLCA1-201ENST00000355430 SENP5Q96HI0 755 aaPredicted RBP11.21□□□□□ -0.61
COLCA1-201ENST00000355430 TRAV36DV7A0A075B6V5 113 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 SSX5O60225 188 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 FKBP2P26885 142 aaKnown RBP11.21□□□□□ -0.62
COLCA1-201ENST00000355430 TCTN1Q2MV58 587 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 SIGIRRQ6IA17 410 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 Q6ZTK2 550 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 OR13C9Q8NGT0 318 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 OR11L1Q8NGX0 322 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 GPBAR1Q8TDU6 330 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 CALHM2Q9HA72 323 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 HIF3AQ9Y2N7 669 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 LGALS8O00214 317 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 PRKNO60260 465 aaPredicted RBP11.21□□□□□ -0.62
COLCA1-201ENST00000355430 SCGB2A1O75556 95 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 SNAPINO95295 136 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 SERPINA5P05154 406 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 OTPQ5XKR4 325 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 STAC2Q6ZMT1 411 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 ERVMER34-1Q9H9K5 563 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 KCNIP1Q9NZI2 227 aa11.21□□□□□ -0.62
COLCA1-201ENST00000355430 BDKRB2P30411 391 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 P2RX1P51575 399 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 MVDP53602 400 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 SGPP2Q8IWX5 399 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF679Q8IYX0 411 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 CARFQ8N187 725 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 OR4D9Q8NGE8 314 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 CPT1CQ8TCG5 803 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 MICU1Q9BPX6 476 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 DEFB127Q9H1M4 99 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 A0A1B0GTQ1 180 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 PMS2P1A4D2B8 440 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 ZGLP1P0C6A0 271 aa11.2□□□□□ -0.62
COLCA1-201ENST00000355430 GABRR1P24046 479 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms