RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RAD52P43351 418 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 CAPZBP47756 277 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 ACKR1Q16570 336 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 SYT14P1Q58G82 188 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 LIPNQ5VXI9 398 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 WFDC8Q8IUA0 241 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 SLAMF6Q96DU3 332 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 SEC22CQ9BRL7 303 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TINAGL1Q9GZM7 467 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-202ENST00000355133 ACER3Q9NUN7 267 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TAS2R5Q9NYW4 299 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 OR6C76A6NM76 312 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 AQP7O14520 342 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TXNL1O43396 289 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 OR2J2O76002 312 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 CTSLP07711 333 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 PIPP12273 146 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-202ENST00000355133 SSTP61278 116 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 RNF4P78317 190 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 GALEQ14376 348 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 FCN2Q15485 313 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 ANKRD16Q6P6B7 361 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 BCO1Q9HAY6 547 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 KLF13Q9Y2Y9 288 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TIMM10BQ9Y5J6 103 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 C5orf49A4QMS7 147 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 HLA-DOBP13765 273 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 A0A1W2PPC4 97 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TRABD2BA6NFA1 517 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 C4orf47A7E2U8 309 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 CSF3P09919 207 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
SCN8A-202ENST00000355133 SELEP16581 610 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 ACHEP22303 614 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 GABRA4P48169 554 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 TMEM81Q6P7N7 255 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 OR52A5Q9H2C5 316 aa12.07□□□□□ -0.48
SCN8A-202ENST00000355133 SLC6A12P48065 614 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 NANOGP1Q8N7R0 232 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 LAT2Q9GZY6 243 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 COL16A1Q07092 1604 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 OR2A25A4D2G3 310 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 SIRPB1O00241 398 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 TNFSF11O14788 317 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 DSCR3O14972 297 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 FCMRO60667 390 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 SBK2P0C263 348 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 ELK1P19419 428 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 RBP2P50120 134 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 CDONQ4KMG0 1287 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 USP51Q70EK9 711 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 C16orf52Q8NHV5 167 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 LYSMD1Q96S90 227 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 EXO1Q9UQ84 846 aaKnown RBP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 OTPQ5XKR4 325 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 NAA40Q86UY6 237 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 CATSPERDQ86XM0 798 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 MORN4Q8NDC4 146 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 OPA3Q9H6K4 179 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 PLEKHF2Q9H8W4 249 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 WSB2Q9NYS7 404 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 CXCL13O43927 109 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 TGM6O95932 706 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 IGLV3-27P01718 113 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 THBS1P07996 1170 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 OR10J4P0C629 311 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 FAM157BP0CG42 384 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 PPICP45877 212 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 RPS23P62266 143 aaKnown RBP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 FCRL6Q6DN72 434 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 SVBPQ8N300 66 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 OR51S1Q8NGJ8 323 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 GAB3Q8WWW8 586 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 ARV1Q9H2C2 271 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 PLK3Q9H4B4 646 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 SLC22A11Q9NSA0 550 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 CCSO14618 274 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 SPI1P17947 270 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 RPS19P39019 145 aaKnown RBP12.06□□□□□ -0.48
SCN8A-202ENST00000355133 TMEM196Q5HYL7 178 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 TRILQ7L0X0 811 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 SLCO5A1Q9H2Y9 848 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 CTSFQ9UBX1 484 aa12.06□□□□□ -0.48
SCN8A-202ENST00000355133 PRRC2BQ5JSZ5 2229 aaKnown RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 ANKRD61A6NGH8 418 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 H0YIG0 161 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 HBE1P02100 147 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 ZDHHC11BP0C7U3 371 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 FKBP2P26885 142 aaKnown RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SDHAP31040 664 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 ACSM5Q6NUN0 579 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms