RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC35D3Q5M8T2 416 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 FNDC7Q5VTL7 733 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM205Q6UW68 189 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 RAB11FIP2Q7L804 512 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 PIP4P1Q86T03 277 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 OR5M1Q8NGP8 315 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 MR1Q95460 341 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 PELOQ9BRX2 385 aaKnown RBP7.74□□□□□ -1.17
TRIM55-204ENST00000353317 CRB3Q9BUF7 120 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 ALG12Q9BV10 488 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 TCF7L1Q9HCS4 588 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 FRRS1LQ9P0K9 344 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 PISDQ9UG56 409 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 KLHDC2Q9Y2U9 406 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 HRH3Q9Y5N1 445 aa7.74□□□□□ -1.17
TRIM55-204ENST00000353317 A0A087WUJ7 227 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 A0A1B0GTH9 108 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM72A0PK05 275 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 UPK3AO75631 287 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 GLCEO94923 617 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 LPLP06858 475 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 S100A11P31949 105 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 ADH7P40394 386 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 UBE2MP61081 183 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 SEC61A1P61619 476 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 RNF4P78317 190 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 IL10RAQ13651 578 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 Q499Y3 187 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 LIPNQ5VXI9 398 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 LEG1Q6P5S2 330 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 PAPD4Q6PIY7 484 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 DNM1P46Q6ZS02 220 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 OR4D10Q8NGI6 311 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 COQ8AQ8NI60 647 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 DAZLQ92904 295 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 CMKLR1Q99788 373 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 GPN1Q9HCN4 374 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 PRODH2Q9UF12 536 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 MRM2Q9UI43 246 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 TRAV8-7A0A075B6U6 113 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 FRG2CA6NGY1 282 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 H0YC42 278 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 H3BSH0 61 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 TEX46H3BTG2 121 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 TSPAN2O60636 221 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 ICOSLGO75144 302 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 STK17BO94768 372 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 IL33O95760 270 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 NAGAP17050 411 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 CTRB1P17538 263 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 MST1P26927 711 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 ITPKBP27987 946 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 ABCD3P28288 659 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 RPS4XP62701 263 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 PCGF3Q3KNV8 242 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 CTRB2Q6GPI1 263 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 SLC36A1Q7Z2H8 476 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF550Q7Z398 422 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 CPEB2Q7Z5Q1 589 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 LRRTM1Q86UE6 522 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 TMPRSS12Q86WS5 348 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 DEFB124Q8NES8 71 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 OR6M1Q8NGM8 313 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 NSMAFQ92636 917 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 PNPLA2Q96AD5 504 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 MRPL48Q96GC5 212 aaKnown RBP7.73□□□□□ -1.17
TRIM55-204ENST00000353317 DMRTA2Q96SC8 542 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 MRI1Q9BV20 369 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 SHARPINQ9H0F6 387 aa7.73□□□□□ -1.17
TRIM55-204ENST00000353317 SPAARA0A1B0GVQ0 90 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 B4E171 279 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 BLOC1S5-TXNDC5H3BN57 136 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 LGALS8O00214 317 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 DCTN6O00399 190 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 GMFGO60234 142 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM127O75204 238 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 PPM1BO75688 479 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 B3GALNT1O75752 331 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 GLSO94925 669 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 UTS2O95399 124 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 MT-CO3P00414 261 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 MAS1P04201 325 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 HIST1H2ABP04908 130 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 NUP62P37198 522 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 MNDAP41218 407 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 TSPAN7P41732 249 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 LTBQ06643 244 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 RIPPLY1Q0D2K3 151 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 TRIP6Q15654 476 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 HES3Q5TGS1 186 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 TMUB2Q71RG4 321 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 HIST3H2AQ7L7L0 130 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 GLB1L2Q8IW92 636 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 OR51A4Q8NGJ6 313 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 OR4C16Q8NGL9 310 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 OR5AK2Q8NH90 309 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 HIST1H2ACQ93077 130 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 GINS4Q9BRT9 223 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms