RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 STMN3Q9NZ72 180 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 COQ3Q9NZJ6 369 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 KLRF1Q9NZS2 232 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 CRIM1Q9NZV1 1036 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 ADAM30Q9UKF2 790 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 ZNF346Q9UL40 294 aaKnown RBP7.31□□□□□ -1.24
CD44-205ENST00000352818 COPS3Q9UNS2 423 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 FKBP7Q9Y680 259 aa7.31□□□□□ -1.24
CD44-205ENST00000352818 hCG_2014768A0A024R1R8 64 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 A0A087WZY1 265 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 A0A1W2PNV4 684 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 A0A1W2PPR1 153 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 SHISA3A0PJX4 238 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 CD8B2A6NJW9 211 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 C17orf51A8MQB3 221 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 E9PI62 339 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 XKRYO14609 159 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 TP53I11O14683 189 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 MAGEB3O15480 346 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 SEC14L5O43304 696 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 TBX1O43435 398 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 SELENOFO60613 162 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 PFDN1O60925 122 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 OR2J2O76002 312 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 WDPCPO95876 746 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 IFNA2P01563 188 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 F13BP05160 661 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 UCHL1P09936 223 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 CD8BP10966 210 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ADH6P28332 368 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 GRPRP30550 384 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 CHRNB4P30926 498 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 PYCR1P32322 319 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 NAA10P41227 235 aaPredicted RBP7.3□□□□□ -1.24
CD44-205ENST00000352818 GDI2P50395 445 aaKnown RBP7.3□□□□□ -1.24
CD44-205ENST00000352818 BCAP31P51572 246 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ZNF41P51814 821 aaPredicted RBP7.3□□□□□ -1.24
CD44-205ENST00000352818 SIRPAP78324 504 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 MXD1Q05195 221 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 FOXF1Q12946 379 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ZNF79Q15937 498 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 PLPPR5Q32ZL2 321 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 TP53I3Q53FA7 332 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 HBMQ6B0K9 141 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ARL9Q6T311 187 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 UNQ9370/PRO34162Q6UXP9 181 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ZNF554Q86TJ5 538 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 LSRQ86X29 649 aaPredicted RBP7.3□□□□□ -1.24
CD44-205ENST00000352818 RFLNBQ8N5W9 214 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 FADS6Q8N9I5 356 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 OR6K6Q8NGW6 343 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 SLC25A43Q8WUT9 341 aaPredicted RBP7.3□□□□□ -1.24
CD44-205ENST00000352818 SNX33Q8WV41 574 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ZNRF4Q8WWF5 429 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 C8orf44Q96CB5 159 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 DDIT4LQ96D03 193 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 RASL10BQ96S79 203 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ATF6BQ99941 703 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 SOSTQ9BQB4 213 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.3□□□□□ -1.24
CD44-205ENST00000352818 METTL7AQ9H8H3 244 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 GALNT9Q9HCQ5 603 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 ALKBH4Q9NXW9 302 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 PPP4R1LQ9P1A2 415 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 EDARQ9UNE0 448 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 TMEM14AQ9Y6G1 99 aa7.3□□□□□ -1.24
CD44-205ENST00000352818 A0A1W2PRG6 482 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 FUOMA2VDF0 154 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 PRSS37A4D1T9 235 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 B4DXG7 233 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 FAM47E-STBD1D6RA91 191 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 NPIPA5E9PKD4 350 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 RGS5O15539 181 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ARL6IP5O75915 188 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 OR6A2O95222 327 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ABHD16AO95870 558 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 HLA-DQB1P01920 261 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 TACSTD2P09758 323 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 EDNRAP25101 427 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 CRABP1P29762 137 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 CASP3P42574 277 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 DAP3P51398 398 aaKnown RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 EGR3Q06889 387 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 PUDPQ08623 228 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ACKR1Q16570 336 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ZNF239Q16600 458 aaKnown RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 BTBD16Q32M84 506 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 FDX2Q6P4F2 183 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 OPN5Q6U736 354 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ARSKQ6UWY0 536 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 H1FNTQ75WM6 255 aaPredicted RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 FAM220AQ7Z4H9 259 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 SLC22A16Q86VW1 577 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 SNX29P2Q8IUI4 249 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 FAM83FQ8NEG4 500 aaPredicted RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 OR2M3Q8NG83 312 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 OR11G2Q8NGC1 345 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 OR10G3Q8NGC4 313 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 OR51L1Q8NGJ5 315 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ZNF417Q8TAU3 575 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms