RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PNLIPRP2P54317 469 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 DCAF12Q5T6F0 453 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 NHLRC1Q6VVB1 395 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 ATG4DQ86TL0 474 aaPredicted RBP9.35□□□□□ -0.91
SMPD4-201ENST00000351288 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 ACBD4Q8NC06 268 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 ZC3HAV1LQ96H79 300 aaKnown RBP9.35□□□□□ -0.91
SMPD4-201ENST00000351288 DDOQ99489 341 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 GHITMQ9H3K2 345 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 MYOTQ9UBF9 498 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 ASH2LQ9UBL3 628 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 FBXL3Q9UKT7 428 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 PRR14LQ5THK1 2151 aa9.35□□□□□ -0.91
SMPD4-201ENST00000351288 A0A1B0GVI7 797 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 BLACEA4D250 179 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 NPIPB9F8W1W9 429 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 SLC26A5P58743 744 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ATXN7L3Q14CW9 347 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 RSPO4Q2I0M5 234 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 LRRC37A5PQ49AS3 106 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 C4orf46Q504U0 113 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 GPR139Q6DWJ6 353 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 STAC2Q6ZMT1 411 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 TPRA1Q86W33 373 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 C20orf85Q9H1P6 137 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 SLA2Q9H6Q3 261 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 LDAHQ9H6V9 325 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ZFP64Q9NPA5 681 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 B9D1Q9UPM9 204 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 K7ESF4 209 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 OGG1O15527 345 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 SYT7O43581 403 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 DNASE1P24855 282 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ART1P52961 327 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 HSF1Q00613 529 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 PMS2CLQ68D20 193 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 FAM198BQ6UWH4 519 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 PLXDC2Q6UX71 529 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 LINC00114Q6XXX2 140 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 OVCH1Q7RTY7 1134 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ADGRG3Q86Y34 549 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 MCEMP1Q8IX19 187 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 CYYR1Q96J86 154 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 INPP5EQ9NRR6 644 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 PLEK2Q9NYT0 353 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 PLA2G3Q9NZ20 509 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ING4Q9UNL4 249 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 DIDO1Q9BTC0 2240 aaKnown RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ABCA4P78363 2273 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 CFAP47Q6ZTR5 3102 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 PRSS37A4D1T9 235 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ALG1L2C9J202 215 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 STK17BO94768 372 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 TSPAN5P62079 268 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 MYBPHQ13203 477 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 GSG1Q2KHT4 349 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 LINC00303Q3SY05 128 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 OGFOD3Q6PK18 319 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 TMEM205Q6UW68 189 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 H1FNTQ75WM6 255 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 RABEPKQ7Z6M1 372 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 ARHGEF39Q8N4T4 335 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 OR1J4Q8NGS1 313 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 DNASE2BQ8WZ79 361 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 UBL7Q96S82 380 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 HRASLSQ9HDD0 168 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 CA10Q9NS85 328 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 SLC22A11Q9NSA0 550 aa9.34□□□□□ -0.91
SMPD4-201ENST00000351288 PCDHGA9Q9Y5G4 932 aaKnown RBP9.34□□□□□ -0.91
SMPD4-201ENST00000351288 DSPP15924 2871 aaKnown RBP9.33□□□□□ -0.92
SMPD4-201ENST00000351288 FITM1A5D6W6 292 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 GPR171O14626 319 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 RGS11O94810 467 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
SMPD4-201ENST00000351288 CLPSP04118 112 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 TRAPPC2P0DI81 140 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 TRAPPC2BP0DI82 140 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 CRABP1P29762 137 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 PTH2RP49190 550 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMPD4-201ENST00000351288 FAM57BQ71RH2 274 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 CASTOR1Q8WTX7 329 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 FCAMRQ8WWV6 532 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 PGAM5Q96HS1 289 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 ZC4H2Q9NQZ6 224 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 LOXL2Q9Y4K0 774 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 MYO7BQ6PIF6 2116 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 BOD1L1Q8NFC6 3051 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 IGHV3-64DA0A0J9YX35 117 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 EIF4E2O60573 245 aaKnown RBP9.33□□□□□ -0.92
SMPD4-201ENST00000351288 LMX1BO60663 402 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 ALX3O95076 343 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 IGLV3-19P01714 112 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 ALDOBP05062 364 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 ANXA3P12429 323 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 VAMP1P23763 118 aa9.33□□□□□ -0.92
SMPD4-201ENST00000351288 MAPK3P27361 379 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms