RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 EIF4E1BA6NMX2 242 aaKnown RBP23.74■■□□□ 1.39
SSBP4-202ENST00000348495 A8MXE2 369 aa23.74■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF454Q8N9F8 522 aa23.74■■□□□ 1.39
SSBP4-202ENST00000348495 RELL2Q8NC24 303 aaPredicted RBP23.74■■□□□ 1.39
SSBP4-202ENST00000348495 OR1K1Q8NGR3 316 aa23.74■■□□□ 1.39
SSBP4-202ENST00000348495 JKAMPQ9P055 326 aa23.74■■□□□ 1.39
SSBP4-202ENST00000348495 ESPL1Q14674 2120 aa23.74■■□□□ 1.39
SSBP4-202ENST00000348495 OR8G3PP0DMU2 310 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 MYL12AP19105 171 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 P2RY6Q15077 328 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 KLHL24Q6TFL4 600 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 SSX6Q7RTT6 188 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 LHFPL3Q86UP9 236 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 FJX1Q86VR8 437 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF433Q8N7K0 673 aaPredicted RBP23.73■■□□□ 1.39
SSBP4-202ENST00000348495 BOD1Q96IK1 185 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 TMEM14AQ9Y6G1 99 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 CHD6Q8TD26 2715 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 A0A1B0GUH1 482 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 DAPL1A0PJW8 107 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 DVL2O14641 736 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 CST2P09228 141 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 TUBA4AP68366 448 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 ADORA2A-AS1P86434 159 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 SLC18B1Q6NT16 456 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 ANKRD16Q6P6B7 361 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 MYO7BQ6PIF6 2116 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 MRGPRGQ86SM5 289 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 LRRC18Q8N456 261 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 ST7LQ8TDW4 575 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 BCL2L2Q92843 193 aaPredicted RBP23.73■■□□□ 1.39
SSBP4-202ENST00000348495 SH3GL3Q99963 347 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 ASH2LQ9UBL3 628 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 SNX5Q9Y5X3 404 aa23.73■■□□□ 1.39
SSBP4-202ENST00000348495 NCOA6Q14686 2063 aaPredicted RBP23.73■■□□□ 1.39
SSBP4-202ENST00000348495 PRR32B1ATL7 298 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 TMCC2O75069 709 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 PCMT1P22061 227 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 TGFBR3Q03167 851 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 EMX1Q04741 257 aaPredicted RBP23.72■■□□□ 1.39
SSBP4-202ENST00000348495 GALEQ14376 348 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 CORO6Q6QEF8 472 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 LINC00346Q8IVM7 164 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 SKA3Q8IX90 412 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 PRR7Q8TB68 274 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 FBXO17Q96EF6 278 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 AMELYQ99218 206 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 CDADC1Q9BWV3 514 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF224Q9NZL3 707 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 LAMP5Q9UJQ1 280 aa23.72■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF670-ZNF695F2Z2N8 137 aa23.71■■□□□ 1.39
SSBP4-202ENST00000348495 MAP2K4P45985 399 aa23.71■■□□□ 1.39
SSBP4-202ENST00000348495 TBCEQ15813 527 aaPredicted RBP23.71■■□□□ 1.39
SSBP4-202ENST00000348495 NANOGP1Q8N7R0 232 aa23.71■■□□□ 1.39
SSBP4-202ENST00000348495 CCDC120Q96HB5 630 aa23.71■■□□□ 1.39
SSBP4-202ENST00000348495 ABHD6Q9BV23 337 aa23.71■■□□□ 1.39
SSBP4-202ENST00000348495 A0A096LPE4 126 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 A0A1W2PPZ6 126 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 TMEM129A0AVI4 362 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 LRRTM2O43300 516 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 LYZL6O75951 148 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 FARS2O95363 451 aaKnown RBP23.7■■□□□ 1.39
SSBP4-202ENST00000348495 ATP6V1B1P15313 513 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 HIST1H3AP68431 136 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 AQP6Q13520 282 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 GABRA6Q16445 453 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 C4orf17Q53FE4 359 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 ZNF684Q5T5D7 378 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 HIST2H3PS2Q5TEC6 136 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 HIST2H3AQ71DI3 136 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 LUZP2Q86TE4 346 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 CXorf67Q86X51 503 aaPredicted RBP23.7■■□□□ 1.39
SSBP4-202ENST00000348495 C1orf162Q8NEQ5 155 aaPredicted RBP23.7■■□□□ 1.39
SSBP4-202ENST00000348495 MAP6Q96JE9 813 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 ALG8Q9BVK2 526 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 ACOT13Q9NPJ3 140 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 GDF2Q9UK05 429 aaPredicted RBP23.7■■□□□ 1.39
SSBP4-202ENST00000348495 POLR1DQ9Y2S0 133 aa23.7■■□□□ 1.39
SSBP4-202ENST00000348495 PCNX1Q96RV3 2341 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 PHYHO14832 338 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 PTHP01270 115 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 EIF2B1Q14232 305 aaKnown RBP23.7■■□□□ 1.38
SSBP4-202ENST00000348495 ZNF322Q6U7Q0 402 aaPredicted RBP23.7■■□□□ 1.38
SSBP4-202ENST00000348495 DCXRQ7Z4W1 244 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 SVOPQ8N4V2 548 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 ZNF485Q8NCK3 441 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 THEM6Q8WUY1 208 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 ASB17Q8WXJ9 295 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 MRPS26Q9BYN8 205 aaKnown RBP23.7■■□□□ 1.38
SSBP4-202ENST00000348495 CHCHD3Q9NX63 227 aaKnown RBP23.7■■□□□ 1.38
SSBP4-202ENST00000348495 ERGIC3Q9Y282 383 aa23.7■■□□□ 1.38
SSBP4-202ENST00000348495 LSM2Q9Y333 95 aaKnown RBP23.7■■□□□ 1.38
SSBP4-202ENST00000348495 EEF1E1-BLOC1S5C9J1V9 151 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 EEF1E1O43324 174 aaKnown RBP23.69■■□□□ 1.38
SSBP4-202ENST00000348495 CD79BP40259 229 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 CDONQ4KMG0 1287 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 SFRP5Q5T4F7 317 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 XAF1Q6GPH4 301 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 CFAP77Q6ZQR2 320 aa23.69■■□□□ 1.38
SSBP4-202ENST00000348495 SYT9Q86SS6 491 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms