RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 C15orf40Q8WUR7 153 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 REG4Q9BYZ8 158 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 APMAPQ9HDC9 416 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 DHCR7Q9UBM7 475 aaKnown RBP13.16□□□□□ -0.3
SMTN-202ENST00000347557 PRODH2Q9UF12 536 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
SMTN-202ENST00000347557 RP1P56715 2156 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 EML5Q05BV3 1969 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 MFSD2BA6NFX1 497 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 ALOX12BO75342 701 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 ASAH2BP0C7U1 165 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 DNASE1L1P49184 302 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
SMTN-202ENST00000347557 RASGEF1BQ0VAM2 473 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
SMTN-202ENST00000347557 ACKR1Q16570 336 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 LINC00346Q8IVM7 164 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 GABRG1Q8N1C3 465 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 BEST3Q8N1M1 668 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 SLC25A44Q96H78 314 aaPredicted RBP13.16□□□□□ -0.3
SMTN-202ENST00000347557 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 MRI1Q9BV20 369 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 GPR160Q9UJ42 338 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 TMEM14AQ9Y6G1 99 aa13.16□□□□□ -0.3
SMTN-202ENST00000347557 LDOC1O95751 146 aaPredicted RBP13.15□□□□□ -0.3
SMTN-202ENST00000347557 HOXC4P09017 264 aaPredicted RBP13.15□□□□□ -0.3
SMTN-202ENST00000347557 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 EXD3Q8N9H8 876 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 OR1J4Q8NGS1 313 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 CASTOR1Q8WTX7 329 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 TBL1XR1Q9BZK7 514 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 SLC19A3Q9BZV2 496 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 ZNF275Q9NSD4 429 aaPredicted RBP13.15□□□□□ -0.3
SMTN-202ENST00000347557 TAS2R8Q9NYW2 309 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 CKLFQ9UBR5 152 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 TMEM82A0PJX8 343 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 TMEM235A6NFC5 223 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
SMTN-202ENST00000347557 KCNAB3O43448 404 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 SRPX2O60687 465 aaPredicted RBP13.15□□□□□ -0.3
SMTN-202ENST00000347557 GABRG2P18507 467 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 ZP3P21754 424 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 CD1CP29017 333 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 STARP49675 285 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 ZNF117Q03924 483 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 OTOSQ8NHW6 89 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 EMC9Q9Y3B6 208 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 CLDN16Q9Y5I7 305 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 WDR87Q6ZQQ6 2873 aa13.15□□□□□ -0.3
SMTN-202ENST00000347557 LOC100289279A0A1B0GTE1 492 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 SLC22A23A1A5C7 686 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 LMX1BO60663 402 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 YPEL5P62699 121 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 FUT7Q11130 342 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 EEF1A1P5Q5VTE0 462 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 C12orf45Q8N5I9 185 aaPredicted RBP13.15□□□□□ -0.31
SMTN-202ENST00000347557 OR1J2Q8NGS2 313 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 OR6N1Q8NGY5 312 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 GPX7Q96SL4 187 aaPredicted RBP13.15□□□□□ -0.31
SMTN-202ENST00000347557 COA4Q9NYJ1 87 aa13.15□□□□□ -0.31
SMTN-202ENST00000347557 SDC3O75056 442 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 OR4E1P0C645 316 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 RABIFP47224 123 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 FLI1Q01543 452 aaPredicted RBP13.14□□□□□ -0.31
SMTN-202ENST00000347557 SLC17A1Q14916 467 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 PDSS1Q5T2R2 415 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 GPR119Q8TDV5 335 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
SMTN-202ENST00000347557 HOXB13Q92826 284 aaPredicted RBP13.14□□□□□ -0.31
SMTN-202ENST00000347557 CMBLQ96DG6 245 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 DZANK1Q9NVP4 752 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
SMTN-202ENST00000347557 FREM3P0C091 2139 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 LAMA1P25391 3075 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 TRBV5-7A0A0A0MS05 114 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 ZNF432O94892 652 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 SNAPINO95295 136 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 CYB5AP00167 134 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 CD2P06729 351 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 CTLA4P16410 223 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 GNALP38405 381 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 FZD2Q14332 565 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 ZNF660Q6AZW8 331 aaPredicted RBP13.14□□□□□ -0.31
SMTN-202ENST00000347557 SLC18B1Q6NT16 456 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
SMTN-202ENST00000347557 ZNF471Q9BX82 626 aaPredicted RBP13.14□□□□□ -0.31
SMTN-202ENST00000347557 VAMP1P23763 118 aa13.13□□□□□ -0.31
SMTN-202ENST00000347557 HTR2CP28335 458 aa13.13□□□□□ -0.31
SMTN-202ENST00000347557 EPHA4P54764 986 aa13.13□□□□□ -0.31
SMTN-202ENST00000347557 ISXQ2M1V0 245 aa13.13□□□□□ -0.31
SMTN-202ENST00000347557 MOGAT2Q3SYC2 334 aa13.13□□□□□ -0.31
SMTN-202ENST00000347557 CDNFQ49AH0 187 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms