RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 GPR119Q8TDV5 335 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 NTNG2Q96CW9 530 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 SLC35E1Q96K37 410 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 DNMT3BQ9UBC3 853 aaKnown RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 POLDIP2Q9Y2S7 368 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 MMACHCQ9Y4U1 282 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 ARL2-SNX15V9GYD0 113 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 COL11A1P12107 1806 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 A8MU76 341 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 TERTO14746 1132 aaKnown RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 DHPSP49366 369 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 POU3F1Q03052 451 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 PRDX1Q06830 199 aaKnown RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 SMIM4Q8WVI0 70 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF778Q96MU6 729 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 BET1O15155 118 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 PTNP21246 168 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 AANATQ16613 207 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 HEYLQ9NQ87 328 aaPredicted RBP12.26□□□□□ -0.45
COL6A3-202ENST00000347401 DCAF16Q9NXF7 216 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 TUSC2O75896 110 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 P2RX3P56373 397 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 FOXK2Q01167 660 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 IKZF1Q13422 519 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 OR4F5Q8NH21 305 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 OR4F4Q96R69 305 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 TSPAN12O95859 305 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 TIMP2P16035 220 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 CCR6P51684 374 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 SPRED3Q2MJR0 410 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 PELI3Q8N2H9 469 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 OR13C5Q8NGS8 318 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 C1QTNF3Q9BXJ4 246 aa12.26□□□□□ -0.45
COL6A3-202ENST00000347401 A0A1W2PQU0 124 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 OR5H8P0DN80 308 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 APEX1P27695 318 aaKnown RBP12.25□□□□□ -0.45
COL6A3-202ENST00000347401 GABREP78334 506 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 OR5B3Q8NH48 314 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 GALNT9Q9HCQ5 603 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 FBXO34Q9NWN3 711 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 PLRG1O43660 514 aaKnown RBP12.25□□□□□ -0.45
COL6A3-202ENST00000347401 RPL12P30050 165 aaKnown RBP12.25□□□□□ -0.45
COL6A3-202ENST00000347401 BMI1P35226 326 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 PKDCCQ504Y2 493 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 IL20RBQ6UXL0 311 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 WNK3Q9BYP7 1800 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 OPN1MWP04001 364 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 OPN1MW2P0DN77 364 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 OPN1MW3P0DN78 364 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 PIGAP37287 484 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 SEMA3BQ13214 749 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 EXOSC2Q13868 293 aaKnown RBP12.25□□□□□ -0.45
COL6A3-202ENST00000347401 OR51S1Q8NGJ8 323 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ADAM11O75078 769 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 CD80P33681 288 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 MFAP5Q13361 173 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 THEM4Q5T1C6 240 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 TMEM184AQ6ZMB5 413 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 AKIP1Q9NQ31 210 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 SLCO3A1Q9UIG8 710 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 PRAMEF4O60810 478 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 AMTP48728 403 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 YPEL5P62699 121 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF626Q68DY1 528 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 LYG2Q86SG7 212 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ZDHHC22Q8N966 263 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF391Q9UJN7 358 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 TRAV20A0A0B4J274 112 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 SUSD5O60279 629 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 FCGR2AP12318 317 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 BIDP55957 195 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 FAM74A3Q4VXF1 159 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 MUCL1Q96DR8 90 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 TMEM128Q5BJH2 165 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ELFN2Q5R3F8 820 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 PRSS42Q7Z5A4 293 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 Q8N9G6 341 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ST8SIA2Q92186 375 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 SLC35B3Q9H1N7 401 aa12.25□□□□□ -0.45
COL6A3-202ENST00000347401 ESRP2Q9H6T0 727 aaKnown RBP12.25□□□□□ -0.45
COL6A3-202ENST00000347401 NCBP2LA6PVI3 153 aaKnown RBP12.24□□□□□ -0.45
COL6A3-202ENST00000347401 SOD1P00441 154 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 POU3F2P20265 443 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-202ENST00000347401 Q1RN00 199 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 FAM57BQ71RH2 274 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 ZNF534Q76KX8 674 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 BTAF1O14981 1849 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 SORBS2O94875 1100 aaKnown RBP12.24□□□□□ -0.45
COL6A3-202ENST00000347401 YIF1AO95070 293 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 STATHP02808 62 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 FOXA1P55317 472 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 RAB38P57729 211 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 MBTPS1Q14703 1052 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 FYTTD1Q96QD9 318 aaKnown RBP12.24□□□□□ -0.45
COL6A3-202ENST00000347401 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
COL6A3-202ENST00000347401 ACOXLQ9NUZ1 547 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms