RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DEGS2Q6QHC5 323 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 PLXDC2Q6UX71 529 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 UNQ9370/PRO34162Q6UXP9 181 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 USP43Q70EL4 1123 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 TUSC5Q8IXB3 177 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 CPT1CQ8TCG5 803 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 GHSRQ92847 366 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 NABP1Q96AH0 204 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 ZNF837Q96EG3 531 aaPredicted RBP9.7□□□□□ -0.86
ECM1-201ENST00000346569 DCLRE1CQ96SD1 692 aaKnown RBP9.7□□□□□ -0.86
ECM1-201ENST00000346569 LINC00470Q9BZP3 86 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 DCSTAMPQ9H295 470 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 SEC61A2Q9H9S3 476 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 GP6Q9HCN6 339 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 POLE4Q9NR33 117 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 ACOXLQ9NUZ1 547 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 PARPBPQ9NWS1 579 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 ZNF175Q9Y473 711 aa9.7□□□□□ -0.86
ECM1-201ENST00000346569 IGSF10Q6WRI0 2623 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 GABRPO00591 440 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 SRSF10O75494 262 aaKnown RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 TGM6O95932 706 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 KRT8P05787 483 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 SPARCP09486 303 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 EDNRAP25101 427 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 RPS11P62280 158 aaKnown RBP eCLIP9.69□□□□□ -0.86
ECM1-201ENST00000346569 MRPS34P82930 218 aaKnown RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 ALKBH1Q13686 389 aaKnown RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 EIF2B1Q14232 305 aaKnown RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 TRAM1Q15629 374 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 INAQ16352 499 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 TSPO2Q5TGU0 170 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 ARL9Q6T311 187 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 LRRN1Q6UXK5 716 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 RHOUQ7L0Q8 258 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 LINGO2Q7L985 606 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 CHMP1BQ7LBR1 199 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 DCXRQ7Z4W1 244 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 MS4A15Q8N5U1 240 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 YIPF7Q8N8F6 280 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 OR10H5Q8NGA6 315 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 OR10S1Q8NGN2 331 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 OR52N5Q8NH56 324 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 ABHD4Q8TB40 342 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 RNF133Q8WVZ7 376 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 SMIM19Q96E16 107 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 TTYH2Q9BSA4 534 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 TMED9Q9BVK6 235 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 CDADC1Q9BWV3 514 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 HDHD5Q9BXW7 423 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 PRRG4Q9BZD6 226 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 ULBP2Q9BZM5 246 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 CXorf56Q9H5V9 222 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 ELOVL3Q9HB03 270 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 EXOSC4Q9NPD3 245 aaKnown RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 FRRS1LQ9P0K9 344 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 CLCF1Q9UBD9 225 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 CAMK2AQ9UQM7 478 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 NOSIPQ9Y314 301 aaKnown RBP9.69□□□□□ -0.86
ECM1-201ENST00000346569 LHFPL6Q9Y693 200 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 PMF1-BGLAPU3KQ54 211 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 KALRNO60229 2985 aa9.69□□□□□ -0.86
ECM1-201ENST00000346569 TRBV2A0A0J9YWF9 115 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 A0A1B0GTH9 108 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 A0A1W2PPL8 197 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 RPL36A-HNRNPH2H7BZ11 118 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 GPRIN2O60269 458 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 MRPL33O75394 65 aaKnown RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 ZNF254O75437 659 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 WNT11O96014 354 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 DCTDP32321 178 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 RPS19P39019 145 aaKnown RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 OPRL1P41146 370 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 GDI2P50395 445 aaKnown RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 CCR9P51686 369 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 HIST1H3AP68431 136 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 SLC3A1Q07837 685 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 ENDOGQ14249 297 aaKnown RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 INSL4Q14641 139 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 STK11Q15831 433 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 SGCAQ16586 387 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 LINC00303Q3SY05 128 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 HIST2H3PS2Q5TEC6 136 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 FAM27BQ5VT28 67 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 ZNF324BQ6AW86 544 aaPredicted RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 C22orf42Q6IC83 251 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 CORO6Q6QEF8 472 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 HIST2H3AQ71DI3 136 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 FGD2Q7Z6J4 655 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 LINC00346Q8IVM7 164 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 OR2G2Q8NGZ5 317 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 SARAFQ96BY9 339 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 RBM24Q9BX46 236 aaKnown RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 MROQ9BYG7 248 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 SLIRPQ9GZT3 109 aaKnown RBP9.68□□□□□ -0.86
ECM1-201ENST00000346569 NELFAQ9H3P2 528 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 C1orf198Q9H425 327 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 GPR35Q9HC97 309 aa9.68□□□□□ -0.86
ECM1-201ENST00000346569 EMC7Q9NPA0 242 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms